RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 Q6ZS49 121 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 OR51E1Q8TCB6 317 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 LSM10Q969L4 123 aaKnown RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 VAMP8Q9BV40 100 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 GGACTQ9BVM4 153 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TM2D1Q9BX74 207 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 PARD6GQ9BYG4 376 aaPredicted RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 CDCP1Q9H5V8 836 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 UQCR10Q9UDW1 63 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 MCTS1Q9ULC4 181 aaKnown RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 IDSB3KWA1 339 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 YIF1AO95070 293 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 ANKRD34CP0C6C1 535 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 UCP1P25874 307 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 BIDP55957 195 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 PIGPP57054 158 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 ZNF92Q03936 586 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 HLA-BQ31612 363 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 ZNF658BQ4V348 819 aaPredicted RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 ACER2Q5QJU3 275 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 OR4A4PQ8NGN8 299 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 MRPL30Q8TCC3 161 aaKnown RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 SPACA9Q96E40 222 aaPredicted RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 DEFB118Q96PH6 123 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 MS4A7Q9GZW8 240 aaPredicted RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 CDH20Q9HBT6 801 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 NTNG1Q9Y2I2 539 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 MEX3AA1L020 520 aaKnown RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 NME2P1O60361 137 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 RPLP1P05386 114 aaKnown RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 ZNF708P17019 499 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 BMP5P22003 454 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 ATP6V0CP27449 155 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 NANOS3P60323 173 aaKnown RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 AADACL3Q5VUY0 350 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 FAM58AQ8N1B3 248 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 OR4C3Q8NH37 302 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 FGF13Q92913 245 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 TMEM9BQ9NQ34 198 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 DECR2Q9NUI1 292 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 COLQQ9Y215 455 aaPredicted RBP3.59□□□□□ -1.84
SOX6-217ENST00000533870 WIPI2Q9Y4P8 454 aa3.59□□□□□ -1.84
SOX6-217ENST00000533870 SPTY2D1-AS1A0A0U1RR47 76 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LOC102723971A0A1B0GUV8 181 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LINC00587B1AMM8 73 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 M0R296 226 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ITGB1BP1O14713 200 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 GJB3O75712 270 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 TIMP1P01033 207 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FABP4P15090 132 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 PNLIPP16233 465 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 CTLA4P16410 223 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 POU3F2P20265 443 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 RPS18P62269 152 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 SUMO1P63165 101 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 OR7A5Q15622 319 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 C10orf128Q5T292 105 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FAM57BQ71RH2 274 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FBXL14Q8N1E6 418 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SIGLECL1Q8N7X8 197 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 OR2V1Q8NHB1 315 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 HSD17B8Q92506 261 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 RBM14Q96PK6 669 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 RTL8AQ9BWD3 113 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 C1QTNF9BB2RNN3 333 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 H0Y980 276 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LDB3O75112 727 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ZNF735P0CB33 412 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SFTPCP11686 197 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 F2RP25116 425 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 EPHA8P29322 1005 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 LPAR6P43657 344 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 KISS1Q15726 138 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SMAD2Q15796 467 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 ZNF124Q15973 351 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LINC01559Q495D7 138 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 MEX3BQ6ZN04 569 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 GLCCI1Q86VQ1 547 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 NR2C2APQ86WQ0 139 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LRRC75AQ8NAA5 344 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 BHLHE23Q8NDY6 225 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SLC24A4Q8NFF2 622 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 RGP1Q92546 391 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 PIGTQ969N2 578 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 C20orf144Q9BQM9 153 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 MBNL1Q9NR56 388 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 A0A0B4J203 849 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 A0A1W2PPE2 198 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 TTRP02766 147 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 MPLP40238 635 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 HNRNPA3P51991 378 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 RPS23P62266 143 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 FAM27BQ5VT28 67 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 PQLC2Q6ZP29 291 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ZNF738Q8NE65 137 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 OR1P1Q8NH06 330 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 RNASEH2CQ8TDP1 164 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 EXTL1Q92935 676 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ADGRG7Q96K78 797 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms