RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SLC26A7Q8TE54 656 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 RGP1Q92546 391 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 ITFG2Q969R8 447 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 APOPT1Q96IL0 206 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 KCTD7Q96MP8 289 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 CHCHD6Q9BRQ6 235 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 COPS4Q9BT78 406 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 POLR2J2Q9GZM3 115 aaKnown RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 NDEL1Q9GZM8 345 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 POLR2J3Q9H1A7 115 aaKnown RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 OR51I2Q9H344 312 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 ING3Q9NXR8 418 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 OR14J1Q9UGF5 321 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 B9D1Q9UPM9 204 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 SH3GLB1Q9Y371 365 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 RAP2CQ9Y3L5 183 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 DNAH6Q9C0G6 4158 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 FAM172BPA6NC97 362 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 RTL8CO15255 209 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 TFAP2AP05549 437 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 BPGMP07738 259 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 RBMY1A1P0DJD3 496 aaKnown RBP8.03□□□□□ -1.12
CSDE1-215ENST00000533818 GPX2P18283 190 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 CFL1P23528 166 aaKnown RBP8.03□□□□□ -1.12
CSDE1-215ENST00000533818 RBM39Q14498 530 aaKnown RBP8.03□□□□□ -1.12
CSDE1-215ENST00000533818 TAF13Q15543 124 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 ZBED5Q49AG3 693 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 KLHL12Q53G59 568 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 OR52W1Q6IF63 320 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 NRMQ8IXM6 262 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 OR4C15Q8NGM1 316 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 HPSE2Q8WWQ2 592 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 AQP3Q92482 292 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 PIGCQ92535 297 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 TMEM106AQ96A25 262 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 ZNF488Q96MN9 340 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 OVOL2Q9BRP0 275 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 THAP7Q9BT49 309 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-215ENST00000533818 IKZF5Q9H5V7 419 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 PCDHB16Q9NRJ7 776 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 LINC00312Q9Y6C7 94 aa8.03□□□□□ -1.12
CSDE1-215ENST00000533818 EVPLLA8MZ36 301 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF732B4DXR9 585 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 SDHDO14521 159 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 SHOXO15266 292 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 RGS11O94810 467 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 CST4P01036 141 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 TNFRSF1BP20333 461 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 GPR4P46093 362 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 ABCE1P61221 599 aaKnown RBP8.02□□□□□ -1.13
CSDE1-215ENST00000533818 PRKCDQ05655 676 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 TNFRSF9Q07011 255 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 EDDM3AQ14507 147 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 HLA-DRB5Q30154 266 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 GFOD2Q3B7J2 385 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 HAGHLQ6PII5 290 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-215ENST00000533818 TGIF2LXQ8IUE1 241 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 ZDHHC21Q8IVQ6 265 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 POC1AQ8NBT0 407 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 OR9I1Q8NGQ6 314 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 TOMM40LQ969M1 308 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 RPEQ96AT9 228 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 TAMM41Q96BW9 452 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 KCNJ15Q99712 375 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 C20orf27Q9GZN8 174 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 RABEP2Q9H5N1 569 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 CCDC134Q9H6E4 229 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 CENPMQ9NSP4 180 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 LIN7CQ9NUP9 197 aaKnown RBP8.02□□□□□ -1.13
CSDE1-215ENST00000533818 VAPAQ9P0L0 249 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 CORO2BQ9UQ03 480 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 SLC22A13Q9Y226 551 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 IER3IP1Q9Y5U9 82 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 WSB1Q9Y6I7 421 aa8.02□□□□□ -1.13
CSDE1-215ENST00000533818 IGHV4OR15-8A0A075B7B6 117 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 A0A087WW49 117 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 FAM183AA6NL82 134 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 CDC42EP2O14613 210 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 SPAG7O75391 227 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 TPPPO94811 219 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 NXPH2O95156 264 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 NDUFB8O95169 186 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 IGKV1D-33P01593 117 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 IGKV1-33P01594 117 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 ANXA2P07355 339 aaKnown RBP8.01□□□□□ -1.13
CSDE1-215ENST00000533818 OR5H8P0DN80 308 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 GDNFP39905 211 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 RPS27P42677 84 aaKnown RBP8.01□□□□□ -1.13
CSDE1-215ENST00000533818 PRRX1P54821 245 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 GNG3P63215 75 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 FGD3Q5JSP0 725 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 PRAMEF5Q5TYX0 476 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 LYG2Q86SG7 212 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 LZICQ8WZA0 190 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF286AQ9HBT8 521 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 NRIP3Q9NQ35 241 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 SDR39U1Q9NRG7 319 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-215ENST00000533818 MRPS28Q9Y2Q9 187 aaKnown RBP8.01□□□□□ -1.13
CSDE1-215ENST00000533818 GMEB1Q9Y692 573 aa8.01□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF737O75373 536 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms