RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 C20orf24Q9BUV8 137 aa13.52□□□□□ -0.24
PCDHA3-202ENST00000532566 MFRPQ9BY79 579 aa13.52□□□□□ -0.24
PCDHA3-202ENST00000532566 RNF150Q9ULK6 438 aa13.52□□□□□ -0.24
PCDHA3-202ENST00000532566 DNAJC13O75165 2243 aa13.52□□□□□ -0.24
PCDHA3-202ENST00000532566 MKRN2OSH3BPM6 223 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 TTRP02766 147 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 EDARADDQ8WWZ3 215 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 DNASE2BQ8WZ79 361 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 ZMIZ1Q9ULJ6 1067 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 ZIC2O95409 532 aaPredicted RBP13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 HLA-DQB1P01920 261 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 AGFG1P52594 562 aaKnown RBP13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 ZNF92Q03936 586 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 HES3Q5TGS1 186 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 FAM58AQ8N1B3 248 aa13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 ADAT1Q9BUB4 502 aaKnown RBP13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.25
PCDHA3-202ENST00000532566 IGKV1D-42A0A075B6H8 117 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 M0R1B8 84 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 UPK3AO75631 287 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 A0A1W2PPC1 479 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 BTBD17A6NE02 478 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 UMAD1C9J7I0 102 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 CST4P01036 141 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 IAPPP10997 89 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 GABRA1P14867 456 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 CA6P23280 308 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ANGPTL6Q8NI99 470 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 GALMQ96C23 342 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 DHRS9Q9BPW9 319 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 TMPRSS13Q9BYE2 586 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 CYB5BO43169 146 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 IL11P20809 199 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 LIMK1P53667 647 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 STARD6P59095 220 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 SURF2Q15527 256 aaPredicted RBP13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ADAM5Q6NVV9 412 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 PRSS54Q6PEW0 395 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 PTX4Q96A99 478 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ANXA10Q9UJ72 324 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 LAMP3Q9UQV4 416 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ARHGEF17Q96PE2 2063 aaPredicted RBP13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 VWA8A3KMH1 1905 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 IGLV1-36A0A0B4J1U3 117 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 FSTP19883 344 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ZBTB44Q8NCP5 570 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 OR10P1Q8NGE3 313 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 OR8U1Q8NH10 309 aa13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ZNF385AQ96PM9 386 aaKnown RBP13.51□□□□□ -0.25
PCDHA3-202ENST00000532566 ADAP1O75689 374 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 CCL2P13500 99 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 MLF1P58340 268 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 HAGHQ16775 308 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 RGS7BPQ6MZT1 257 aaPredicted RBP13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 LCN15Q6UWW0 184 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 MOB1BQ7L9L4 216 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 BOD1Q96IK1 185 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 GHITMQ9H3K2 345 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 NAA60Q9H7X0 242 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 OR5B21A6NL26 309 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 C21orf140B9A014 251 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 H3BP45 60 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 ADIRFQ15847 76 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 HPSE2Q8WWQ2 592 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 CLDN23Q96B33 292 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 MAP6Q96JE9 813 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 ZNF75AQ96N20 296 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 CEP250Q9BV73 2442 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 ZNF17P17021 662 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 IL3RAP26951 378 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 SSX9Q7RTT3 188 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 CHRNA10Q9GZZ6 450 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 TMEM74BQ9NUR3 256 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 PSENENQ9NZ42 101 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 GNG13Q9P2W3 67 aa13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 TIMM8BQ9Y5J9 83 aaPredicted RBP13.5□□□□□ -0.25
PCDHA3-202ENST00000532566 TMEM30CPA0ZSE6 113 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 CST7O76096 145 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 APOA2P02652 100 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 MT-ND4LP03901 98 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 IGKV3-11P04433 115 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 LINC01590Q5TEZ4 76 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 ATPIF1Q9UII2 106 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 ATP6V1G2-DDX39BF2Z307 99 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 RAB27BO00194 218 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 ZP3P21754 424 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 SLC25A42Q86VD7 318 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms