RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 NRIP2Q9BQI9 281 aa13.84□□□□□ -0.19
PKP3-207ENST00000530695 CADM1Q9BY67 442 aaKnown RBP13.84□□□□□ -0.19
PKP3-207ENST00000530695 HEXA-AS1Q9H8Q6 139 aa13.84□□□□□ -0.19
PKP3-207ENST00000530695 FBLN5Q9UBX5 448 aa13.84□□□□□ -0.19
PKP3-207ENST00000530695 OR14J1Q9UGF5 321 aa13.84□□□□□ -0.19
PKP3-207ENST00000530695 MRM2Q9UI43 246 aaKnown RBP13.84□□□□□ -0.19
PKP3-207ENST00000530695 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.84□□□□□ -0.19
PKP3-207ENST00000530695 hCG_1809904A0A1W2PP81 198 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 A0A1W2PPE2 198 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 A0A1W2PR64 198 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 A0A1W2PRV1 198 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 DHRS7CA6NNS2 312 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 RPP14O95059 124 aaKnown RBP13.83□□□□□ -0.2
PKP3-207ENST00000530695 C2orf68Q2NKX9 166 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 GID4Q8IVV7 300 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 C11orf42Q8N5U0 333 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 YIPF7Q8N8F6 280 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 PPP1R35Q8TAP8 253 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 HES4Q9HCC6 221 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 USE1Q9NZ43 259 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 SLC22A13Q9Y226 551 aa13.83□□□□□ -0.2
PKP3-207ENST00000530695 RRP15Q9Y3B9 282 aaKnown RBP13.83□□□□□ -0.2
PKP3-207ENST00000530695 PRKDCP78527 4128 aaKnown RBP13.83□□□□□ -0.2
PKP3-207ENST00000530695 PLXNB1O43157 2135 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 TK1P04183 234 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 KRT8P05787 483 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 CCL3L1P16619 93 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 COX7A1P24310 79 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 MPZP25189 248 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 PAX6P26367 422 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 LGALS4P56470 323 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 AANATQ16613 207 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 ODF4Q2M2E3 257 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 KDM4DQ6B0I6 523 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 Q6ZSR3 168 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 SSX6Q7RTT6 188 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 ANGPTL5Q86XS5 388 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 CALHM1Q8IU99 346 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 ZDHHC13Q8IUH4 622 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 FAM110DQ8TAY7 271 aaPredicted RBP13.82□□□□□ -0.2
PKP3-207ENST00000530695 TRMT10AQ8TBZ6 339 aaKnown RBP13.82□□□□□ -0.2
PKP3-207ENST00000530695 TBX5Q99593 518 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 PLEKHA1Q9HB21 404 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 ENOPH1Q9UHY7 261 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 SIGLEC9Q9Y336 463 aa13.82□□□□□ -0.2
PKP3-207ENST00000530695 FAM230AA0A1W2PPH8 454 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
PKP3-207ENST00000530695 CCL1P22362 96 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 BMXP51813 675 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 ERVFRD-1P60508 538 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 IL24Q13007 206 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 ZNF273Q14593 569 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 OR4C13Q8NGP0 309 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 PKIBQ9C010 78 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 GABARAPL1Q9H0R8 117 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 RAB18Q9NP72 206 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
PKP3-207ENST00000530695 SLC7A11Q9UPY5 501 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 KIAA2026Q5HYC2 2103 aa13.81□□□□□ -0.2
PKP3-207ENST00000530695 H3BSH0 61 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 K7N7A8 449 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 SYT7O43581 403 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 CSF1P09603 554 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 FASP25445 335 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 KIR2DS4P43632 304 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 EFNB2P52799 333 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 ERVK11-1P61568 191 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 CRIP3Q6Q6R5 217 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 ZNF782Q6ZMW2 699 aaPredicted RBP13.8□□□□□ -0.2
PKP3-207ENST00000530695 Q6ZTK2 550 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 AMIGO2Q86SJ2 522 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 CATSPERDQ86XM0 798 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 ASCC1Q8N9N2 400 aaKnown RBP13.8□□□□□ -0.2
PKP3-207ENST00000530695 AP4S1Q9Y587 144 aa13.8□□□□□ -0.2
PKP3-207ENST00000530695 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 A0A1W2PQL4 384 aaPredicted RBP13.79□□□□□ -0.2
PKP3-207ENST00000530695 APOL3O95236 402 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 OR2T7P0C7T2 308 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 HTR1FP30939 366 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 COL10A1Q03692 680 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 HERPUD1Q15011 391 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 C11orf88Q6PI97 169 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 OR10H4Q8NGA5 316 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 OR2T6Q8NHC8 308 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 CIB1Q99828 191 aa13.79□□□□□ -0.2
PKP3-207ENST00000530695 RANBP3Q9H6Z4 567 aaPredicted RBP13.79□□□□□ -0.2
PKP3-207ENST00000530695 METTL15A6NJ78 407 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 C17orf98A8MV24 154 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 F8VVB4 439 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 F8VWA3 439 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 CHST1O43916 411 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 GATBO75879 557 aaKnown RBP13.78□□□□□ -0.2
PKP3-207ENST00000530695 SULT1C4O75897 302 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 ATP6V1E1P36543 226 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 DLX6P56179 175 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 UBE2V2Q15819 145 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 C1orf146Q5VVC0 180 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 LIAT1Q6ZQX7 453 aa13.78□□□□□ -0.2
PKP3-207ENST00000530695 LHFPL4Q7Z7J7 247 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms