RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TMED3Q9Y3Q3 217 aa4.18□□□□□ -1.74
AMBRA1-209ENST00000529963 A0A0B4J203 849 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 CLDN34H7C241 214 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 ANGPT2O15123 496 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 SURF4O15260 269 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 OR5F1O95221 314 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 IGKV3-20P01619 116 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 CST2P09228 141 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TUBG1P23258 451 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 IFNA8P32881 189 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 MTPNP58546 118 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 BTG1P62324 171 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 ERVK-25P63136 954 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 CX3CL1P78423 397 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 PSG4Q00888 419 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 FMODQ06828 376 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 FAM27BQ5VT28 67 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 BTNL3Q6UXE8 466 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TRPT1Q86TN4 253 aaKnown RBP4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 ZNF283Q8N7M2 679 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 OR4D11Q8NGI4 311 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 PFN4Q8NHR9 129 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TMEM239Q8WW34 195 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 GEMIN6Q8WXD5 167 aaKnown RBP4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 NABP1Q96AH0 204 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TAMM41Q96BW9 452 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TLCD1Q96CP7 247 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 FAM71F1Q96KD3 344 aaPredicted RBP4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 C4orf45Q96LM5 186 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 SAMD8Q96LT4 415 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 RBP7Q96R05 134 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 PRSS27Q9BQR3 290 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 EBF4Q9BQW3 602 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 OR2H1Q9GZK4 316 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TXNIPQ9H3M7 391 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 KAT8Q9H7Z6 458 aaKnown RBP4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 NANOGQ9H9S0 305 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 PATZ1Q9HBE1 687 aaKnown RBP4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 MEPEQ9NQ76 525 aaPredicted RBP4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 MMP26Q9NRE1 261 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TUBG2Q9NRH3 451 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 GPR173Q9NS66 373 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 MAN2C1Q9NTJ4 1040 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 IL20RAQ9UHF4 553 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 NDUFAF1Q9Y375 327 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 MED31Q9Y3C7 131 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 UGT2A1Q9Y4X1 527 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 TIMM10BQ9Y5J6 103 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 INSIG2Q9Y5U4 225 aa4.17□□□□□ -1.74
AMBRA1-209ENST00000529963 IGKV1D-43A0A0B4J1Z2 117 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 A6NIZ1 184 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 C12orf71A8MTZ7 269 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 A8MXK9 166 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 F8VVB4 439 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 F8VWA3 439 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 TRAPPC2LH3BP13 241 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 SLC22A2O15244 555 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 NGFP01138 241 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 IFNA14P01570 189 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 TSPAN19P0C672 248 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 PPIAL4GP0DN37 164 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 COX5BP10606 129 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 THRBP10828 461 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 AREGP15514 252 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 KITLGP21583 273 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 MSR1P21757 451 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 LAP3P28838 519 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 MDH2P40926 338 aaKnown RBP4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 RAP1BP61224 184 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 RPL27P61353 136 aaKnown RBP4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 RAP1AP62834 184 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 SLC34A1Q06495 639 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 SCRN3Q0VDG4 424 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 PSG7Q13046 419 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 SELPLGQ14242 412 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 ZMYND11Q15326 602 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 TMEM255AQ5JRV8 349 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 KLF17Q5JT82 389 aaPredicted RBP4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 ZNF774Q6NX45 483 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 SLC25A47Q6Q0C1 308 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 LRRN1Q6UXK5 716 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 CCDC80Q76M96 950 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 LRRC28Q86X40 367 aaPredicted RBP4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 NKAIN4Q8IVV8 208 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 PARP8Q8N3A8 854 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 OR2Z1Q8NG97 314 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 OR10V1Q8NGI7 309 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 OR52E2Q8NGJ4 325 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 OR10A6Q8NH74 314 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 DYDC1Q8WWB3 177 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 LIPHQ8WWY8 451 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 MAGEB18Q96M61 343 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 SLITRK2Q9H156 845 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 TMBIM4Q9HC24 238 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 DCAF16Q9NXF7 216 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 UBQLN2Q9UHD9 624 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 RIMS3Q9UJD0 308 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 KLHL21Q9UJP4 597 aa4.16□□□□□ -1.74
AMBRA1-209ENST00000529963 AURKCQ9UQB9 309 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms