RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DMKNQ6E0U4 476 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 BTN2A1Q7KYR7 527 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 SERPINA12Q8IW75 414 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 FGFRL1Q8N441 504 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 PARP16Q8N5Y8 322 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 FAM216BQ8N7L0 139 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 OR5D14Q8NGL3 314 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 NANPQ8TBE9 248 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 RGP1Q92546 391 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 SPSB1Q96BD6 273 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 MED30Q96HR3 178 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 GAFA1Q96PS6 74 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 HES4Q9HCC6 221 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 SCN3BQ9NY72 215 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 MTCH1Q9NZJ7 389 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF222Q9UK12 451 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 DHDHQ9UQ10 334 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 CUBNO60494 3623 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 NKX6-3A6NJ46 265 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 PTGES3LE9PB15 166 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 GPR37O15354 613 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 SIGLEC5O15389 551 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 ENSAO43768 121 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 NXPH2O95156 264 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 TFF1P04155 84 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 CDK1P06493 297 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 LIPFP07098 398 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 PPIAL4GP0DN37 164 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 SELLP14151 372 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 GABRA2P47869 451 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 IL13RA1P78552 427 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 LRRC10Q5BKY1 277 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 LHFPL2Q6ZUX7 228 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 SLC25A26Q70HW3 274 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 NANOGP1Q8N7R0 232 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 OR13C9Q8NGT0 318 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 GPR148Q8TDV2 347 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 TSEN15Q8WW01 171 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 ST8SIA4Q92187 359 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 MYDGFQ969H8 173 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 SMIM19Q96E16 107 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 SDSLQ96GA7 329 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 OPALINQ96PE5 141 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF281Q9Y2X9 895 aa10.5□□□□□ -0.73
CCDC90B-216ENST00000529856 RFPL4AA6NLU0 287 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 RFPL4AL1F8VTS6 287 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 PLATP00750 562 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 OCM2P0CE71 109 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 OCMP0CE72 109 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 PRDX2P32119 198 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 VHLP40337 213 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 SOX2P48431 317 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 WNT4P56705 351 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 SLC35A2P78381 396 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 SCGB2A2Q13296 93 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 IKZF1Q13422 519 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 DGUOKQ16854 277 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF529Q6P280 563 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 MKXQ8IYA7 352 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 BATF2Q8N1L9 274 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 CD177Q8N6Q3 437 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 ZFP41Q8N8Y5 198 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 PNLDC1Q8NA58 520 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 LY6G5BQ8NDX9 201 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 GHSRQ92847 366 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 SLAMF9Q96A28 289 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 CEP19Q96LK0 163 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 CDCA4Q9BXL8 241 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 NEK6Q9HC98 313 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 PAK1IP1Q9NWT1 392 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 SLC25A10Q9UBX3 287 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 RPUSD1Q9UJJ7 312 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 RAB26Q9ULW5 256 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 ERGIC3Q9Y282 383 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 TPRKBQ9Y3C4 175 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 MAB21L2Q9Y586 359 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 PCDHGB5Q9Y5G0 923 aa10.49□□□□□ -0.73
CCDC90B-216ENST00000529856 F8VVB4 439 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 F8VWA3 439 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 MYL12BO14950 172 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 SULT1B1O43704 296 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 KNG1P01042 644 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 CD2P06729 351 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 EPHA1P21709 976 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 POU3F4P49335 361 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 CAV3P56539 151 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 TAS2R43P59537 309 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 FGF12P61328 243 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 PDZK1IP1Q13113 114 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 DOC2BQ14184 412 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 ARMCX4Q5H9R4 360 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 ASPHD2Q6ICH7 369 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 CRIP3Q6Q6R5 217 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 RNF144BQ7Z419 303 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNRF1Q8ND25 227 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 SGCDQ92629 289 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 UPRTQ96BW1 309 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 PGLYRP3Q96LB9 341 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms