RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 IL11RAQ14626 422 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 ESX1Q8N693 406 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 CMSS1Q9BQ75 279 aaKnown RBP16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 SULT4A1Q9BR01 284 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 SH2D2AQ9NP31 389 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 NCKAP5O14513 1909 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 H7C2Y5 167 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 SYNGR3O43761 229 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 CFIP05156 583 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 FCGR2CP31995 323 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 SUCLG1P53597 346 aaKnown RBP16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 FXYD4P59646 89 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 FLI1Q01543 452 aaPredicted RBP16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 PDCD1Q15116 288 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 HFEQ30201 348 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 PIGYQ3MUY2 71 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 FBXL17Q9UF56 701 aa16.4■□□□□ 0.22
TM9SF1-206ENST00000528669 CYC1P08574 325 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 PVALBP20472 110 aaPredicted RBP16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 RAB35Q15286 201 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 TSPO2Q5TGU0 170 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 OR1F12Q8NHA8 337 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 M1APQ8TC57 530 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 SAT2Q96F10 170 aaPredicted RBP16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 MARS2Q96GW9 593 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 NRIP2Q9BQI9 281 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 SEC11CQ9BY50 192 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 NSG1A0A0A6YYJ2 146 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 CCDC85CA6NKD9 419 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 C9J4A7 227 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 TAAR5O14804 337 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 GEMIN2O14893 280 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 DEDDO75618 318 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 CBR3O75828 277 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 IFNA21P01568 189 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 ZNF32P17041 273 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 NFYBP25208 207 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 CAV2P51636 162 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 SPAG16Q8N0X2 631 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 AGBL5Q8NDL9 886 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 SPSB1Q96BD6 273 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 INTS12Q96CB8 462 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 PARP12Q9H0J9 701 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 NDRG3Q9UGV2 375 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 PRELID3BQ9Y3B1 194 aa16.39■□□□□ 0.21
TM9SF1-206ENST00000528669 FCGR3AP08637 254 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 H2AFB1P0C5Y9 115 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 ECI1P42126 302 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 TMEM33P57088 247 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 SMCO1Q147U7 214 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 BORCS8Q96FH0 119 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 PRRX2Q99811 253 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 PILRBQ9UKJ0 227 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 IGKV1-12A0A0C4DH73 117 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 NDUFA2O43678 99 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 SNAPINO95295 136 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 IGKV1D-12P01611 117 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 OR5AC1P0C628 307 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 HTR5AP47898 357 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 MLF1P58340 268 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 EIF5AP63241 154 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 DHRS7BQ6IAN0 325 aaPredicted RBP16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 BATF2Q8N1L9 274 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 GPR137CQ8N3F9 429 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 NECAP2Q9NVZ3 263 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 RCC2Q9P258 522 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 MLXQ9UH92 298 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 TUBD1Q9UJT1 453 aa16.38■□□□□ 0.21
TM9SF1-206ENST00000528669 CST4P01036 141 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 RBP2P50120 134 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 SULT1A2P50226 295 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 B3GALT5-AS1P59052 145 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 CNN3Q15417 329 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 PHLDA2Q53GA4 152 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 TMEM268Q5VZI3 342 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 EIF5AL1Q6IS14 154 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 CCDC54Q8NEL0 328 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 OR14L1PQ8NHC6 308 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 FGFBP3Q8TAT2 258 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 ERGIC1Q969X5 290 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 BSCL2Q96G97 398 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 TMEM38BQ9NVV0 291 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 EDARQ9UNE0 448 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 AMDHD2Q9Y303 409 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 SHANK1Q9Y566 2161 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 RNASEK-C17orf49H0YIS7 233 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 ZNF728P0DKX0 622 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 CHATP28329 748 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 CARD18P57730 90 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 RAC3P60763 192 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 PMS2CLQ68D20 193 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 OR10AD1Q8NGE0 317 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 OR10Z1Q8NGY1 313 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 DECR2Q9NUI1 292 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 TRIOBPQ9H2D6 2365 aa16.37■□□□□ 0.21
TM9SF1-206ENST00000528669 C9JQL5 133 aa16.36■□□□□ 0.21
TM9SF1-206ENST00000528669 CXCL13O43927 109 aa16.36■□□□□ 0.21
TM9SF1-206ENST00000528669 NRASP01111 189 aa16.36■□□□□ 0.21
TM9SF1-206ENST00000528669 SFTA3P0C7M3 94 aa16.36■□□□□ 0.21
TM9SF1-206ENST00000528669 ABCA11PQ4W5N1 156 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms