RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 POMT1Q9Y6A1 747 aa27.15■■□□□ 1.94
SSSCA1-205ENST00000527920 FAM230AA0A1W2PPH8 454 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 SLC1A7O00341 560 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 KNG1P01042 644 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 IGHA1P01876 353 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 RAB40BQ12829 278 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 GALEQ14376 348 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 CNN3Q15417 329 aaKnown RBP27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 UTS2BQ765I0 119 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 RDH10Q8IZV5 341 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 PELI1Q96FA3 418 aa27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 METTL8Q9H825 291 aaKnown RBP27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 MRPS18AQ9NVS2 196 aaKnown RBP27.14■■□□□ 1.94
SSSCA1-205ENST00000527920 A0A1W2PQ09 198 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 H3BSH0 61 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 BAG2O95816 211 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 MELTFP08582 738 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 HTR1AP08908 422 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 NANOS3P60323 173 aaKnown RBP27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 LDLRAD3Q86YD5 345 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 SSMEM1Q8WWF3 244 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 TNFRSF14Q92956 283 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 C4orf36Q96KX1 117 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 SIRT7Q9NRC8 400 aa27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 SMPD3Q9NY59 655 aaPredicted RBP27.13■■□□□ 1.93
SSSCA1-205ENST00000527920 IGKV1-27A0A075B6S5 117 aa27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 BLMHQ13867 455 aa27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 NCR3LG1Q68D85 454 aa27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 PIP4P2Q8N4L2 257 aa27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 ADAT3Q96EY9 351 aaPredicted RBP27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 BORCS8Q96FH0 119 aa27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 ALG8Q9BVK2 526 aa27.12■■□□□ 1.93
SSSCA1-205ENST00000527920 J3QLW9 94 aa27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 RPSAP08865 295 aaKnown RBP27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 ZNF19P17023 458 aa27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 CAPZA1P52907 286 aa27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 MRPL28Q13084 256 aaKnown RBP27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 CEP19Q96LK0 163 aa27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 FAM234AQ9H0X4 552 aa27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 ELL3Q9HB65 397 aaPredicted RBP27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 HHLA2Q9UM44 414 aa27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 CAB39Q9Y376 341 aaPredicted RBP27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 RPL36Q9Y3U8 105 aaKnown RBP27.11■■□□□ 1.93
SSSCA1-205ENST00000527920 A0A0U1RQK1 487 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 OR4C45A6NMZ5 311 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 RNASEK-C17orf49H0YIS7 233 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 LPCAT4Q643R3 524 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 ZNF649Q9BS31 505 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 C8orf4Q9NR00 106 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 MTCH1Q9NZJ7 389 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 MYRFQ9Y2G1 1151 aa27.1■■□□□ 1.93
SSSCA1-205ENST00000527920 EEF1B2P24534 225 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 RBP2P50120 134 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 RPL15P61313 204 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 ALKBH1Q13686 389 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 PDZD9Q8IXQ8 264 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 ZNF555Q8NEP9 628 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 OR5D13Q8NGL4 314 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 TBC1D15Q8TC07 691 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 HAVCR2Q8TDQ0 301 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 APH1BQ8WW43 257 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 SPSB1Q96BD6 273 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 AMBNQ9NP70 447 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 ERVK13-1Q9NX77 482 aa27.09■■□□□ 1.93
SSSCA1-205ENST00000527920 ZNF20P17024 532 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 PRKACBP22694 351 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 UBE2E1P51965 193 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 LHFPL3Q86UP9 236 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 Q8IYB0 196 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 FGGYQ96C11 551 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 ZNF747Q9BV97 191 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 SEBOXQ9HB31 216 aaPredicted RBP27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 C19orf12Q9NSK7 152 aa27.08■■□□□ 1.93
SSSCA1-205ENST00000527920 IGKV1-9A0A0C4DH69 117 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 A0A1W2PPH5 198 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 ATP1B3P54709 279 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 RPL31P62899 125 aaKnown RBP27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 KLHL22Q53GT1 634 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 SLC25A26Q70HW3 274 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 FAM185AQ8N0U4 392 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 JAM3Q9BX67 310 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 CHIAQ9BZP6 476 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 FAM96BQ9Y3D0 163 aa27.07■■□□□ 1.92
SSSCA1-205ENST00000527920 NPFFO15130 113 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 TK1P04183 234 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 FBP1P09467 338 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 ATF1P18846 271 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 CEBPDP49716 269 aaPredicted RBP27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 ACSM1Q08AH1 577 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 LHFPL2Q6ZUX7 228 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 PACRGLQ8N7B6 248 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 ZNF676Q8N7Q3 588 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 OR52I1Q8NGK6 324 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 OR14J1Q9UGF5 321 aa27.06■■□□□ 1.92
SSSCA1-205ENST00000527920 POM121CA8CG34 1229 aa27.05■■□□□ 1.92
SSSCA1-205ENST00000527920 K7N7A8 449 aa27.05■■□□□ 1.92
SSSCA1-205ENST00000527920 WBP4O75554 376 aaKnown RBP27.05■■□□□ 1.92
SSSCA1-205ENST00000527920 MT-ND2P03891 347 aa27.05■■□□□ 1.92
SSSCA1-205ENST00000527920 AZGP1P25311 298 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms