RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CHST5Q9GZS9 411 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 NOX4Q9NPH5 578 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 FAM118AQ9NWS6 357 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 FRRS1LQ9P0K9 344 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.37
CAPN1-213ENST00000527897 H0YAE9 185 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 CLDN34H7C241 214 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 J3QRE1 110 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 CRYBA1P05813 215 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 GABRB1P18505 474 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 EEF1B2P24534 225 aaKnown RBP12.76□□□□□ -0.37
CAPN1-213ENST00000527897 POU3F4P49335 361 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 FUT6P51993 359 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 IL24Q13007 206 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 CNN3Q15417 329 aaKnown RBP12.76□□□□□ -0.37
CAPN1-213ENST00000527897 ZSCAN26Q16670 478 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 LRRC36Q1X8D7 754 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
CAPN1-213ENST00000527897 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 PNKDQ8N490 385 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 ZNF561Q8N587 486 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 Q8N7P7 452 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 ZNF676Q8N7Q3 588 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
CAPN1-213ENST00000527897 ZNF555Q8NEP9 628 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 OR4M1Q8NGD0 313 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 RHOXF1Q8NHV9 184 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 C8orf46Q8TAG6 207 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-213ENST00000527897 ADAT3Q96EY9 351 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-213ENST00000527897 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 SDSLQ96GA7 329 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 PKIBQ9C010 78 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 MYRFQ9Y2G1 1151 aa12.76□□□□□ -0.37
CAPN1-213ENST00000527897 IGKV1-27A0A075B6S5 117 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 FAM181BA6NEQ2 426 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 RNASEK-C17orf49H0YIS7 233 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 NOS1APO75052 506 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-213ENST00000527897 FADS2O95864 444 aaKnown RBP12.75□□□□□ -0.37
CAPN1-213ENST00000527897 IGHV4-59P01825 116 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 PIPP12273 146 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-213ENST00000527897 MPZP25189 248 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 RPL31P62899 125 aaKnown RBP12.75□□□□□ -0.37
CAPN1-213ENST00000527897 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 GALEQ14376 348 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 OR13C3Q8NGS6 347 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 OR10AC1Q8NH08 325 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 TBC1D15Q8TC07 691 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 PP6455Q8WZ26 134 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 CEP19Q96LK0 163 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 CHIAQ9BZP6 476 aa12.75□□□□□ -0.37
CAPN1-213ENST00000527897 ISG20L2Q9H9L3 353 aaKnown RBP12.75□□□□□ -0.37
CAPN1-213ENST00000527897 SMPD3Q9NY59 655 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-213ENST00000527897 TRBV23-1A0A0A0MS06 115 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 MEIOCA2RUB1 952 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 F8VVB4 439 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 F8VWA3 439 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 M0R1W7 72 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 NPFFO15130 113 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 ANGPTL7O43827 346 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 CALCBP10092 127 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 ATP1B3P54709 279 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 MTCP1P56278 107 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 ALKBH1Q13686 389 aaKnown RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 OR51A4Q8NGJ6 313 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 SSMEM1Q8WWF3 244 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 CYGBQ8WWM9 190 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 EMG1Q92979 244 aaKnown RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 RFT1Q96AA3 541 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 DMRTB1Q96MA1 342 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 MYCBPQ99417 103 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 PRDM13Q9H4Q3 707 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 METTL8Q9H825 291 aaKnown RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 UNKLQ9H9P5 680 aaKnown RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 HES4Q9HCC6 221 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 HHLA2Q9UM44 414 aa12.74□□□□□ -0.37
CAPN1-213ENST00000527897 CAB39Q9Y376 341 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 RPL36Q9Y3U8 105 aaKnown RBP12.74□□□□□ -0.37
CAPN1-213ENST00000527897 MEX3AA1L020 520 aaKnown RBP12.73□□□□□ -0.37
CAPN1-213ENST00000527897 CLIC3O95833 236 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 CYB5AP00167 134 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 PAHP00439 452 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 KNG1P01042 644 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 TK1P04183 234 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 FBP1P09467 338 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 ATF1P18846 271 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 MDKP21741 143 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-213ENST00000527897 AZGP1P25311 298 aaKnown RBP12.73□□□□□ -0.37
CAPN1-213ENST00000527897 RBP2P50120 134 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 ERVK11-1P61568 191 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 COL10A1Q03692 680 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 SMN1Q16637 294 aaKnown RBP12.73□□□□□ -0.37
CAPN1-213ENST00000527897 LPCAT4Q643R3 524 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms