RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 C1GALT1C1LP0DN25 315 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IGHV4-38-2P0DP08 117 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 DAOP14920 347 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 CEACAM8P31997 349 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 CCR7P32248 378 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 GCKP35557 465 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 OR1D4P47884 311 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 FOXG1P55316 489 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 GNG3P63215 75 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SLC35A1P78382 337 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 TWF1Q12792 350 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 MLF2Q15773 248 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 SIRPB2Q5JXA9 342 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 FAM219BQ5XKK7 198 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 TNFAIP8L2Q6P589 184 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 SMARCD3Q6STE5 483 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 BAIAP2L2Q6UXY1 529 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 GGNQ86UU5 652 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 COMMD7Q86VX2 200 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 P2RY8Q86VZ1 359 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 RAB43Q86YS6 212 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 FTMTQ8N4E7 242 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SUMF1Q8NBK3 374 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 OR51G1Q8NGK1 321 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 OR6T1Q8NGN1 323 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 OR51E1Q8TCB6 317 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 RDH5Q92781 318 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 TMEM54Q969K7 222 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SARAFQ96BY9 339 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 C12orf43Q96C57 262 aaKnown RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 PPCDCQ96CD2 204 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SMIM12Q96EX1 92 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 PIK3IP1Q96FE7 263 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 BTF3L4Q96K17 158 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 PGLYRP3Q96LB9 341 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 OR11A1Q9GZK7 315 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SCAND2PQ9GZW5 306 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IL1RAPQ9NPH3 570 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SLC7A10Q9NS82 523 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 GSKIPQ9P0R6 139 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 RAB22AQ9UL26 194 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 UFC1Q9Y3C8 167 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 LSM5Q9Y4Y9 91 aaKnown RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 ZBED9Q6R2W3 1325 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 NRCAMQ92823 1304 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 ABCC6O95255 1503 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 LY75O60449 1722 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 COL18A1P39060 1754 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 MAP2P11137 1827 aaKnown RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 UBR3Q6ZT12 1888 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 A0A087WUJ7 227 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 A0A0G2JLM5 398 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 A0A0G2JMP0 313 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 MSGN1A6NI15 193 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 METTL15A6NJ78 407 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 NPIPB9F8W1W9 429 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 GPR31O00270 319 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 BHLHE40O14503 412 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 CA11O75493 328 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 SCRG1O75711 98 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 CYB5R3P00387 301 aaPredicted RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 HPNP05981 417 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 MRPL3P09001 348 aaKnown RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 RBMY1CP0DJD4 496 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 CYBAP13498 195 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 MAKP20794 623 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 HIST1H1TP22492 207 aaPredicted RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 ANOS1P23352 680 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 SLC6A1P30531 599 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 NR4A2P43354 598 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 RPS9P46781 194 aaKnown RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 GCLMP48507 274 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 MFAP2P55001 183 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 CDC42P60953 191 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 TFF2Q03403 129 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 PLP2Q04941 152 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 BAXQ07812 192 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 PUDPQ08623 228 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 IRF4Q15306 451 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 TRMT12Q53H54 448 aaKnown RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 SYT6Q5T7P8 510 aaPredicted RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 KCTD16Q68DU8 428 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 SYCE2Q6PIF2 218 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 Q6YL49 198 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 IDO2Q6ZQW0 420 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 RASSF6Q6ZTQ3 369 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 ZNF771Q7L3S4 317 aaPredicted RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 GALNT10Q86SR1 603 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 CATSPER3Q86XQ3 398 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 OR4M2Q8NGB6 313 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 OR52E2Q8NGJ4 325 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 OR1P1Q8NH06 330 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 C16orf52Q8NHV5 167 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms