RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SMARCD3Q6STE5 483 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CBLN3Q6UW01 205 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TMUB2Q71RG4 321 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SLC16A14Q7RTX9 510 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SLC36A1Q7Z2H8 476 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR2W3Q7Z3T1 314 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SZRD1Q7Z422 152 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CENPVQ7Z7K6 275 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 SBSPONQ8IVN8 264 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ZNF695Q8IW36 515 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SGPP2Q8IWX5 399 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 PDZD9Q8IXQ8 264 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 PDIK1LQ8N165 341 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SLC22A24Q8N4F4 322 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DRAM1Q8N682 238 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 GVQW1Q8N7I0 195 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 LRTM2Q8N967 370 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 NAT8LQ8N9F0 302 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CYB561A3Q8NBI2 242 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR8G5Q8NG78 346 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR11H6Q8NGC7 330 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR4M1Q8NGD0 313 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR8H1Q8NGG4 311 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR51G2Q8NGK0 314 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR5L1Q8NGL2 311 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR11L1Q8NGX0 322 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR10Z1Q8NGY1 313 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR13G1Q8NGZ3 307 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR4Q3Q8NH05 313 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 PIFOQ8TCI5 191 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 PNPT1Q8TCS8 783 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 GPR151Q8TDV0 419 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 C4orf3Q8WVX3 66 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DNAJA4Q8WW22 397 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 LIPHQ8WWY8 451 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ACOT11Q8WXI4 607 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 PTP4A1Q93096 173 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 LHX4Q969G2 390 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SLC38A4Q969I6 547 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TMEM54Q969K7 222 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 NABP1Q96AH0 204 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ESAMQ96AP7 390 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 HAVCR1Q96D42 359 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DUS3LQ96G46 650 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 AURKBQ96GD4 344 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 SLC25A44Q96H78 314 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 ITCHQ96J02 903 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 MPP4Q96JB8 637 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CCDC115Q96NT0 180 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TECTBQ96PL2 329 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TRNT1Q96Q11 434 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 OR2M2Q96R28 347 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CPNE1Q99829 537 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TMEM246Q9BRR3 403 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TMEM43Q9BTV4 400 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 FUT8Q9BYC5 575 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR11A1Q9GZK7 315 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 POLR2J2Q9GZM3 115 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 MFFQ9GZY8 342 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 POLR2J3Q9H1A7 115 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 TLNRD1Q9H1K6 362 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 C11orf68Q9H3H3 251 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 TPK1Q9H3S4 243 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 GLIPR2Q9H4G4 154 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ARMC7Q9H6L4 198 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 NHEJ1Q9H9Q4 299 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 CDH20Q9HBT6 801 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SLCO1B3Q9NPD5 702 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 MIEF1Q9NQG6 463 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 FBXO6Q9NRD1 293 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 EXD2Q9NVH0 621 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TMEM38BQ9NVV0 291 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CALML5Q9NZT1 146 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 MYEF2Q9P2K5 600 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 RNF150Q9ULK6 438 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TRAV36DV7A0A075B6V5 113 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 A0A0G2JN53 185 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MDFIC2A0A1B0GVS7 189 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TCRBV4S1A1TA0A5B7 111 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MACROD2A1Z1Q3 448 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CFAP73A6NFT4 308 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 OOEPA6NGQ2 149 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 GLOD5A6NK44 160 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 LYNX1G3V0Z9 82 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 H0Y980 276 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 H3BUX3 64 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 LGALS9O00182 355 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SLC28A1O00337 649 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 UBE2CO00762 179 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 HDAC3O15379 428 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SIGLEC5O15389 551 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SAP30O75446 220 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 UGT2B17O75795 530 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 KLHL2O95198 593 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 AHSA1O95433 338 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MBD3O95983 291 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CSTAP01040 98 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 IFNB1P01574 187 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 IGHG2P01859 326 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 IGF1P05019 195 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms