RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 ITGA3P26006 1051 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 PPP1CCP36873 323 aaKnown RBP8.98□□□□□ -0.97
SPIDR-225ENST00000524141 ARL4DP49703 201 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 CRIP3Q6Q6R5 217 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 PRSS58Q8IYP2 241 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 APCDD1LQ8NCL9 501 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 TOMM40LQ969M1 308 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 C18orf12Q96KH6 178 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 Q96M66 194 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 DOK5Q9P104 306 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 TCFL5Q9UL49 500 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 V9GYS6 101 aa8.98□□□□□ -0.97
SPIDR-225ENST00000524141 ELOA3CA0A087WX78 387 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 ZNF850A8MQ14 1090 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 H3BQ15 152 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 TRAF3IP2O43734 574 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 MSX1P28360 303 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 SFTPDP35247 375 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 FBXW4P57775 412 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 SLC25A53Q5H9E4 307 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 C9orf152Q5JTZ5 239 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 OGFOD3Q6PK18 319 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 OR13D1Q8NGV5 346 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 OR14L1PQ8NHC6 308 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 KIAA1456Q9P272 454 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 HSF4Q9ULV5 492 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 RALGAPA1Q6GYQ0 2036 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 C2orf72A6NCS6 295 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 TLX3O43711 291 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 NDUFS6O75380 124 aaKnown RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 TAGLN2P37802 199 aaKnown RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 GUCA1AP43080 201 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 NDUFA6P56556 154 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 UBE2KP61086 200 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 LSM6P62312 80 aaKnown RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 NHLH2Q02577 135 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 MFAP5Q13361 173 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 UBE2V2Q15819 145 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 SP6Q3SY56 376 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 ZNF574Q6ZN55 896 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 BOD1Q96IK1 185 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 WDR77Q9BQA1 342 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-225ENST00000524141 ANGPTL4Q9BY76 406 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 NELFAQ9H3P2 528 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 ZNF160Q9HCG1 818 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 SLC2A9Q9NRM0 540 aa8.97□□□□□ -0.97
SPIDR-225ENST00000524141 FAM230AA0A1W2PPH8 454 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 ZNF726A6NNF4 738 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 ZNF587BE7ETH6 402 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 HSPA12AO43301 675 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 QDPRP09417 244 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 EWSR1Q01844 656 aaKnown RBP eCLIP8.96□□□□□ -0.97
SPIDR-225ENST00000524141 SMAD4Q13485 552 aaKnown RBP8.96□□□□□ -0.97
SPIDR-225ENST00000524141 HIST3H3Q16695 136 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 ZNF674Q2M3X9 581 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 CARD17Q5XLA6 110 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 CARFQ8N187 725 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 CCDC71LQ8N9Z2 235 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 RAB39BQ96DA2 213 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 LYZL4Q96KX0 146 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 OXGR1Q96P68 337 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 UFSP2Q9NUQ7 469 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 ZDHHC8Q9ULC8 765 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 MMP17Q9ULZ9 603 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 MMP24Q9Y5R2 645 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 PCDH15Q96QU1 1955 aa8.96□□□□□ -0.97
SPIDR-225ENST00000524141 A0A1W2PPC4 97 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 IFITM10A6NMD0 228 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 PITX3O75364 302 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 HIST1H1BP16401 226 aaKnown RBP8.96□□□□□ -0.98
SPIDR-225ENST00000524141 FAHP16930 419 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 ANOS1P23352 680 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 GPX4P36969 197 aaPredicted RBP8.96□□□□□ -0.98
SPIDR-225ENST00000524141 VEGFBP49765 207 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 SRPXP78539 464 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 ELOBQ15370 118 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 Q6ZSR3 168 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 LANCL3Q6ZV70 420 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 ZNF383Q8NA42 475 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 PLPP5Q8NEB5 264 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 OR2G3Q8NGZ4 309 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 SLAMF9Q96A28 289 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 MSI2Q96DH6 328 aaKnown RBP8.96□□□□□ -0.98
SPIDR-225ENST00000524141 LIN37Q96GY3 246 aaPredicted RBP8.96□□□□□ -0.98
SPIDR-225ENST00000524141 RARRES2Q99969 163 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 NIPSNAP3BQ9BS92 247 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 HDHD3Q9BSH5 251 aaPredicted RBP8.96□□□□□ -0.98
SPIDR-225ENST00000524141 RCL1Q9Y2P8 373 aaKnown RBP8.96□□□□□ -0.98
SPIDR-225ENST00000524141 PIAS3Q9Y6X2 628 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 TRANK1O15050 2925 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 USP34Q70CQ2 3546 aa8.96□□□□□ -0.98
SPIDR-225ENST00000524141 A0A1B0GX78 115 aa8.95□□□□□ -0.98
SPIDR-225ENST00000524141 RAMP1O60894 148 aa8.95□□□□□ -0.98
SPIDR-225ENST00000524141 CDS2O95674 445 aa8.95□□□□□ -0.98
SPIDR-225ENST00000524141 IGLV3-19P01714 112 aa8.95□□□□□ -0.98
SPIDR-225ENST00000524141 HSPB1P04792 205 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms