RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 YIF1BQ5BJH7 314 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 DMRTC1Q5HYR2 192 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 RBM48Q5RL73 367 aaKnown RBP10.45□□□□□ -0.74
VEGFA-225ENST00000523950 DMKNQ6E0U4 476 aaPredicted RBP10.45□□□□□ -0.74
VEGFA-225ENST00000523950 XAF1Q6GPH4 301 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 CALHM1Q8IU99 346 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 Q8IYB0 196 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 ANGPTL6Q8NI99 470 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 TRMT10AQ8TBZ6 339 aaKnown RBP10.45□□□□□ -0.74
VEGFA-225ENST00000523950 RAB40AQ8WXH6 277 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 THRSPQ92748 146 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 MED30Q96HR3 178 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 DMRTB1Q96MA1 342 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 NRIP2Q9BQI9 281 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 MRI1Q9BV20 369 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 RBM38Q9H0Z9 239 aaKnown RBP10.45□□□□□ -0.74
VEGFA-225ENST00000523950 WDR13Q9H1Z4 485 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 DUSP21Q9H596 190 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 HES4Q9HCC6 221 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 BLOC1S6Q9UL45 172 aa10.45□□□□□ -0.74
VEGFA-225ENST00000523950 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 IGKV1-9A0A0C4DH69 117 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 KIR2DS1A0A191URI9 304 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 OR2AT4A6NND4 320 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 PTGES3LE9PB15 166 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 NDUFB3O43676 98 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 SULT1B1O43704 296 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 ENSAO43768 121 aaKnown RBP10.44□□□□□ -0.74
VEGFA-225ENST00000523950 LALBAP00709 142 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 SRP14P37108 136 aaKnown RBP10.44□□□□□ -0.74
VEGFA-225ENST00000523950 ERVK11-1P61568 191 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 LRRC10Q5BKY1 277 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 ACP7Q6ZNF0 438 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 ZNF788Q6ZQV5 615 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 C1QL2Q7Z5L3 287 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 SATL1Q86VE3 508 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 MKXQ8IYA7 352 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 OR13C9Q8NGT0 318 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 NPRL2Q8WTW4 380 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 RGP1Q92546 391 aaPredicted RBP10.44□□□□□ -0.74
VEGFA-225ENST00000523950 GHSRQ92847 366 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 DACT3Q96B18 629 aaPredicted RBP10.44□□□□□ -0.74
VEGFA-225ENST00000523950 C7orf69Q9H7B7 122 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 RHOFQ9HBH0 211 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 MMP26Q9NRE1 261 aa10.44□□□□□ -0.74
VEGFA-225ENST00000523950 IGKV1-27A0A075B6S5 117 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 DVL1O14640 695 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SIGLEC5O15389 551 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 RGS10O43665 173 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 NXPH2O95156 264 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 KNG1P01042 644 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 PSG2P11465 335 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 AMY2BP19961 511 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 RAB3AP20336 220 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 CRHBPP24387 322 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 MTCP1P56278 107 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 IL13RA1P78552 427 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 PAX8Q06710 450 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 IRF3Q14653 427 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 ZNF529Q6P280 563 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 ANGPTL5Q86XS5 388 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SAXO1Q8IYX7 474 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 PNLDC1Q8NA58 520 aaKnown RBP10.43□□□□□ -0.74
VEGFA-225ENST00000523950 NANPQ8TBE9 248 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 TMEM106AQ96A25 262 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SEH1LQ96EE3 360 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SDSLQ96GA7 329 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 PGLYRP3Q96LB9 341 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 CEP19Q96LK0 163 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 CCL13Q99616 98 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 NUDT16L1Q9BRJ7 211 aaKnown RBP10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SEBOXQ9HB31 216 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SMURF1Q9HCE7 757 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SNTG1Q9NSN8 517 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 PAK1IP1Q9NWT1 392 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-225ENST00000523950 RSL24D1Q9UHA3 163 aaKnown RBP10.43□□□□□ -0.74
VEGFA-225ENST00000523950 ZNF222Q9UK12 451 aa10.43□□□□□ -0.74
VEGFA-225ENST00000523950 SIRT4Q9Y6E7 314 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-225ENST00000523950 ARHGAP32A7KAX9 2087 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 C2CD3Q4AC94 2353 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 IGKV1D-17A0A075B6S4 117 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 TRBV5-5A0A0J9YX44 114 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 MAGEB3O15480 346 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 ALDOBP05062 364 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 HCKP08631 526 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 SOX2P48431 317 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 CAV3P56539 151 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 GMFBP60983 142 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 PPP3R1P63098 170 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 PDZK1IP1Q13113 114 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 SPHARQ15513 63 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 Q499Y3 187 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 FIP1L1Q6UN15 594 aaKnown RBP10.42□□□□□ -0.74
VEGFA-225ENST00000523950 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 SLC25A26Q70HW3 274 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 PRSS48Q7RTY5 328 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 ZNF561Q8N587 486 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 FAM216BQ8N7L0 139 aa10.42□□□□□ -0.74
VEGFA-225ENST00000523950 ZSCAN4Q8NAM6 433 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-225ENST00000523950 OR5T2Q8NGG2 359 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms