RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 MYPOPQ86VE0 399 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RPS19BP1Q86WX3 136 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 LACC1Q8IV20 430 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CPNE9Q8IYJ1 553 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 Q8N402 240 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CLDN19Q8N6F1 224 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 GPR26Q8NDV2 337 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 NFAM1Q8NET5 270 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 OR2T12Q8NG77 320 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 OR4F6Q8NGB9 312 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 OR6M1Q8NGM8 313 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CD200R1Q8TD46 325 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 MAGEE2Q8TD90 523 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CYGBQ8WWM9 190 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 LCN9Q8WX39 176 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 TMEM37Q8WXS4 190 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ITCHQ96J02 903 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 JSRP1Q96MG2 331 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF75AQ96N20 296 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZFP3Q96NJ6 502 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CCDC115Q96NT0 180 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 OR52E6Q96RD3 313 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 KCNA7Q96RP8 456 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF347Q96SE7 839 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 TEAD3Q99594 435 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 MAPKAP1Q9BPZ7 522 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 TRAF4Q9BUZ4 470 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RSPO3Q9BXY4 272 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 VN1R1Q9GZP7 353 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SRMSQ9H3Y6 488 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ANKRD19PQ9H560 264 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CXorf21Q9HAI6 301 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ABCB9Q9NP78 766 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 GSN-AS1Q9NRJ2 163 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 C1orf123Q9NWV4 160 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 C1orf109Q9NX04 203 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 BABAM2Q9NXR7 383 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF226Q9NYT6 803 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 OPN4Q9UHM6 478 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 WDR83OSQ9Y284 106 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RNF11Q9Y3C5 154 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF337Q9Y3M9 751 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 A0A0J9YY10 115 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 A0A1B0GTI1 187 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 PQLC2LA1A4F0 135 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 CENPXA8MT69 81 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 H0YL77 283 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 CLDN34H7C241 214 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 hCG_2039718K7EN88 272 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 FXYD1O00168 92 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SOCS2O14508 198 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ARPC1BO15143 372 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SYT7O43581 403 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 OR1I1O60431 355 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 MRPS14O60783 128 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 CTNSO60931 367 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 UGT2B11O75310 529 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 LY6HO94772 140 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 RGS11O94810 467 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TMEM50AO95807 157 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TCRBP04435 133 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 IFNW1P05000 195 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 OCM2P0CE71 109 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 NHLRC4P0CG21 123 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 MPC1LP0DKB6 136 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 GGT1P19440 569 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 KITLGP21583 273 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 MDKP21741 143 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 PPIBP23284 216 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 IL2RGP31785 369 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 HPCAL1P37235 193 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 NKX2-1P43699 371 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 HTR5AP47898 357 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 RFX3P48380 749 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 EIF2B2P49770 351 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 XKP51811 444 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TMBIM6P55061 237 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 PROK1P58294 105 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SMCO1Q147U7 214 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SPHARQ15513 63 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ZNHIT3Q15649 155 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 LTB4RQ15722 352 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 KCNJ8Q15842 424 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ARMCX4Q5H9R4 360 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 PAGE3Q5JUK9 113 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 OR2G6Q5TZ20 316 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 HACD4Q5VWC8 232 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 C22orf42Q6IC83 251 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 FRMPD2BQ6IN97 320 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 LRRN1Q6UXK5 716 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ANKRD37Q7Z713 158 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TRAPPC5Q8IUR0 188 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 APRG1Q8IVJ8 170 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 UEVLDQ8IX04 471 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 RIMKLAQ8IXN7 391 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 PIANPQ8IYJ0 282 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 C8orf59Q8N0T1 100 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 OR4Q3Q8NH05 313 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 OR2V1Q8NHB1 315 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms