RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MPGP29372 298 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 TSC22D1Q15714 1073 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 RELL2Q8NC24 303 aaPredicted RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF680Q8NEM1 530 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PTPRDP23468 1912 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 ANKRD20A5PA0PJZ0 165 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 LRP5LA4QPB2 252 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SHOXO15266 292 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SNRNP70P08621 437 aaKnown RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SLC6A1P30531 599 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PPP1R1AQ13522 171 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 MESP1Q9BRJ9 268 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 MRPL22Q9NWU5 206 aaKnown RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 A0A0U1RQK1 487 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 A0A1W2PPE2 198 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 A0A1W2PR64 198 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 A0A1W2PRV1 198 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 ADAM11O75078 769 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR2F2O95006 317 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 AGFG2O95081 481 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR2F1Q13607 317 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 NAA40Q86UY6 237 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 SAV1Q9H4B6 383 aaPredicted RBP11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 NARFLQ9H6Q4 476 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 EIF2S3P41091 472 aaKnown RBP11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 SSSCA1O60232 199 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 SCGB2A1O75556 95 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 NGFP01138 241 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 M6PRP20645 277 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 LGALS4P56470 323 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 HES1Q14469 280 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 TCTE3Q8IZS6 198 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 C2orf50Q96LR7 162 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 SDHCQ99643 169 aaPredicted RBP11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 TAF9BQ9HBM6 251 aa11.49□□□□□ -0.57
PCDHGB1-201ENST00000523390 VSIG8P0DPA2 414 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 KITLGP21583 273 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 CFHR1Q03591 330 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 SLC38A6Q8IZM9 456 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 MSI2Q96DH6 328 aaKnown RBP11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 H3BP45 60 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 HMGB3O15347 200 aaKnown RBP11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 LIMK1P53667 647 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 FAM27BQ5VT28 67 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 FBXW9Q5XUX1 488 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 SLC35G3Q8N808 338 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR1S2Q8NGQ3 325 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 TINAGQ9UJW2 476 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 TRAF3IP2O43734 574 aaPredicted RBP11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 PGA4P0DJD7 388 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 PGA3P0DJD8 388 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 GABRA1P14867 456 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 RPL12P30050 165 aaKnown RBP11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 HLXQ14774 488 aaPredicted RBP11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 LINC01590Q5TEZ4 76 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 GALMQ96C23 342 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 NLRC5Q86WI3 1866 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 KLF4O43474 513 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF205O95201 554 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 TGM6O95932 706 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 IAPPP10997 89 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 NKX6-1P78426 367 aaPredicted RBP11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 CST9LP1Q5W188 147 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 WDR13Q9H1Z4 485 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
PCDHGB1-201ENST00000523390 LOC101059948A0A1B0GTJ6 334 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR5B21A6NL26 309 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 FPR2P25090 351 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PLA1AQ53H76 456 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 Q8IYB0 196 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 KCNRGQ8N5I3 272 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 DUSP18Q8NEJ0 188 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 SLC39A9Q9NUM3 307 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 ERRFI1Q9UJM3 462 aaPredicted RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PCNX1Q96RV3 2341 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 GEMIN2O14893 280 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 APOA2P02652 100 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 ADRA2CP18825 462 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 IL3RAP26951 378 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 CALCRP30988 508 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 SNTB1Q13884 538 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 FAM74A1Q5RGS3 127 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 NHLRC1Q6VVB1 395 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 NUFIP2Q7Z417 695 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 LRRC29Q8WV35 223 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms