RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 RFKQ969G6 155 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 PKIBQ9C010 78 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 BEX1Q9HBH7 125 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 POLDIP2Q9Y2S7 368 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 FAM230AA0A1W2PPH8 454 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 MEIOCA2RUB1 952 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 CLPSL1A2RUU4 121 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 KNG1P01042 644 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 ATP6V1E1P36543 226 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 SNRPGP62308 76 aaKnown RBP10.1□□□□□ -0.79
VEGFA-223ENST00000523125 ACSM1Q08AH1 577 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 IL24Q13007 206 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 ZIK1Q3SY52 487 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-223ENST00000523125 OLFML2AQ68BL7 652 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 NCR3LG1Q68D85 454 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 RDH10Q8IZV5 341 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 FAM185AQ8N0U4 392 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 LINC01006Q8NI28 216 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 C17orf50Q8WW18 174 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 CHST5Q9GZS9 411 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 DPAGT1Q9H3H5 408 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 MTCH1Q9NZJ7 389 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 AASSQ9UDR5 926 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
VEGFA-223ENST00000523125 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.793e-7■■□□□ 12.6
VEGFA-223ENST00000523125 CAB39Q9Y376 341 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-223ENST00000523125 LOC107986453A0A1B0GWG9 222 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 H0YAE9 185 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 SLC1A7O00341 560 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 TK1P04183 234 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 ALDH3A2P51648 485 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 CAPZA1P52907 286 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 NANOS3P60323 173 aaKnown RBP10.09□□□□□ -0.79
VEGFA-223ENST00000523125 ERVFRD-1P60508 538 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 RPL31P62899 125 aaKnown RBP10.09□□□□□ -0.79
VEGFA-223ENST00000523125 BLMHQ13867 455 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 OCLNQ16625 522 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 ZFP1Q6P2D0 407 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 FDX2Q6P4F2 183 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 MKXQ8IYA7 352 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 CBR4Q8N4T8 237 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 ZSCAN4Q8NAM6 433 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-223ENST00000523125 CCDC54Q8NEL0 328 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 OR4M1Q8NGD0 313 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 OR5D13Q8NGL4 314 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 OR2G2Q8NGZ5 317 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 RNFT2Q96EX2 444 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 ADAT3Q96EY9 351 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-223ENST00000523125 MBOAT4Q96T53 435 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 CITED1Q99966 193 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 PLEKHA1Q9HB21 404 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 FRRS1LQ9P0K9 344 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 OR14J1Q9UGF5 321 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 SLC7A11Q9UPY5 501 aa10.09□□□□□ -0.79
VEGFA-223ENST00000523125 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 IGKV1-9A0A0C4DH69 117 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 K7N7A8 449 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF737O75373 536 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 ISG15P05161 165 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 UBCP0CG48 685 aaKnown RBP10.08□□□□□ -0.8
VEGFA-223ENST00000523125 CCL3L1P16619 93 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 GABRB1P18505 474 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 FUT6P51993 359 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 DLX6P56179 175 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 OR12D2P58182 307 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF273Q14593 569 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 MIDNQ504T8 468 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 KIAA2026Q5HYC2 2103 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 GDPGP1Q6ZNW5 385 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 Q6ZSV7 163 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 KCTD20Q7Z5Y7 419 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 C10orf35Q96D05 121 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 ADI1Q9BV57 179 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 FAM234AQ9H0X4 552 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 EXOGQ9Y2C4 368 aaKnown RBP10.08□□□□□ -0.8
VEGFA-223ENST00000523125 SF3B6Q9Y3B4 125 aaKnown RBP10.08□□□□□ -0.8
VEGFA-223ENST00000523125 RNF114Q9Y508 228 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 ORC6Q9Y5N6 252 aa10.08□□□□□ -0.8
VEGFA-223ENST00000523125 DAPL1A0PJW8 107 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 SLC16A6O15403 523 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 ANGPTL7O43827 346 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 GATBO75879 557 aaKnown RBP10.07□□□□□ -0.8
VEGFA-223ENST00000523125 CLPXO76031 633 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 PAHP00439 452 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 PAX6P26367 422 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 PROK1P58294 105 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 ACTC1P68032 377 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 ACTA1P68133 377 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 COL10A1Q03692 680 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 TMEM244Q5VVB8 128 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 MEDAGQ5VYS4 303 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 TREML4Q6UXN2 200 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 CCDC121Q6ZUS5 278 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 SLC25A26Q70HW3 274 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 FAM220AQ7Z4H9 259 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 OR10AC1Q8NH08 325 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms