RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 POC1AQ8NBT0 407 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 PXT1Q8NFP0 134 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 HPS1Q92902 700 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 SLC25A28Q96A46 364 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 WDR13Q9H1Z4 485 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 SMURF1Q9HCE7 757 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 ING4Q9UNL4 249 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 A6NHS1 94 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 SRRM5B3KS81 715 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 IFNL4K9M1U5 179 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 AIPO00170 330 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 NOS1APO75052 506 aaPredicted RBP13.67□□□□□ -0.22
LSM1-204ENST00000522515 ZNF205O95201 554 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 SFTPBP07988 381 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 ACAA1P09110 424 aaPredicted RBP13.67□□□□□ -0.22
LSM1-204ENST00000522515 BCL3P20749 454 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 ERVK11-1P61568 191 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 P2RY14Q15391 338 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 LRRC75A-AS1Q8N1F1 130 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 C19orf18Q8NEA5 215 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 OR10K1Q8NGX5 313 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 SEH1LQ96EE3 360 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 CEP19Q96LK0 163 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 C1orf147Q96MC9 270 aaPredicted RBP13.67□□□□□ -0.22
LSM1-204ENST00000522515 NRIP2Q9BQI9 281 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 CHODLQ9H9P2 273 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 ELL3Q9HB65 397 aaPredicted RBP13.67□□□□□ -0.22
LSM1-204ENST00000522515 DAPK2Q9UIK4 370 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 CSMD1Q96PZ7 3565 aa13.67□□□□□ -0.22
LSM1-204ENST00000522515 TRAPPC2LH3BP13 241 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.66□□□□□ -0.22
LSM1-204ENST00000522515 ZNF701M0R085 212 aaPredicted RBP13.66□□□□□ -0.22
LSM1-204ENST00000522515 KDM4BO94953 1096 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 GLRA1P23415 457 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 CFPP27918 469 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 CD80P33681 288 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 RAB11BQ15907 218 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 C1orf87Q8N0U7 546 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 DGCR14Q96DF8 476 aaKnown RBP13.66□□□□□ -0.22
LSM1-204ENST00000522515 S100A13Q99584 98 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 BARHL1Q9BZE3 327 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 KCNK15Q9H427 330 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 MYOZ1Q9NP98 299 aaPredicted RBP13.66□□□□□ -0.22
LSM1-204ENST00000522515 RBFOX1Q9NWB1 397 aaKnown RBP13.66□□□□□ -0.22
LSM1-204ENST00000522515 STEAP1Q9UHE8 339 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 ARID1AO14497 2285 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 A0A0B4J203 849 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 A0A1W2PP11 408 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 CALCBP10092 127 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 RSU1Q15404 277 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 SLC22A6Q4U2R8 563 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 SFRP4Q6FHJ7 346 aaPredicted RBP13.66□□□□□ -0.22
LSM1-204ENST00000522515 OR51D1Q8NGF3 324 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 TBC1D15Q8TC07 691 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 HES4Q9HCC6 221 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 NPTNQ9Y639 398 aa13.66□□□□□ -0.22
LSM1-204ENST00000522515 FLNBO75369 2602 aaKnown RBP13.65□□□□□ -0.22
LSM1-204ENST00000522515 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 CLDN25C9JDP6 229 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 NXPH2O95156 264 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 SERPINA2P20848 420 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 PDLIM4P50479 330 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 TMEM33P57088 247 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 AVPI1Q5T686 147 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 IDNKQ5T6J7 187 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 OR10K2Q6IF99 312 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 ACP7Q6ZNF0 438 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 DYNC2LI1Q8TCX1 351 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 FAM3DQ96BQ1 224 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 LIN7BQ9HAP6 207 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 BATF3Q9NR55 127 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 IL36GQ9NZH8 169 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 IL36RNQ9UBH0 155 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 PPIAL4AQ9Y536 164 aa13.65□□□□□ -0.22
LSM1-204ENST00000522515 IGHV3OR15-7A0A075B7D8 119 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 PPIHO43447 177 aaKnown RBP13.64□□□□□ -0.23
LSM1-204ENST00000522515 HTR3BO95264 441 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 BPNT1O95861 308 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 UBBP0CG47 229 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 VSIG8P0DPA2 414 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 ARSBP15848 533 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 BTG1P62324 171 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 ZMYND11Q15326 602 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 DGUOKQ16854 277 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 C2orf76Q3KRA6 126 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 ELP2Q6IA86 826 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 DNM1P46Q6ZS02 220 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 CROCCP3Q8IVE0 287 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 Q8IYB0 196 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 FAM58AQ8N1B3 248 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 DEFB108BQ8NET1 73 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 Q8NFD4 153 aa13.64□□□□□ -0.23
LSM1-204ENST00000522515 FAM168AQ92567 244 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms