RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PRRG3Q9BZD7 231 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 RACGAP1Q9H0H5 632 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SYT4Q9H2B2 425 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 OR51V1Q9H2C8 321 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 VCXQ9H320 206 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 VCX3BQ9H321 246 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 RERGLQ9H628 205 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 DNAJC4Q9NNZ3 241 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 NGBQ9NPG2 151 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 RPRD1BQ9NQG5 326 aaKnown RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 POLE4Q9NR33 117 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 IMPAD1Q9NX62 359 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SMPD3Q9NY59 655 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 B3GNT2Q9NY97 397 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF226Q9NYT6 803 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 KCNN3Q9UGI6 736 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 MOKQ9UQ07 419 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TIMM10BQ9Y5J6 103 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 GMPPBQ9Y5P6 360 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SLC25A15Q9Y619 301 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CNTRLQ7Z7A1 2325 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 DMXL2Q8TDJ6 3036 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 KMT2BQ9UMN6 2715 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ATRXP46100 2492 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 TRAV24A0A0B4J272 114 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 A0A1W2PPK0 400 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 A0A1W2PR80 420 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CCDC182A6NF36 153 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 DPRXA6NFQ7 191 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 TVP23AA6NH52 213 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 DEFB108AA8MXU0 73 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF593O00488 134 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MPZL2O60487 215 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GLCEO94923 617 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 UBL3O95164 117 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GOSR1O95249 250 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PTHP01270 115 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HLA-HP01893 362 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SERPINA5P05154 406 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GYPBP06028 91 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CST2P09228 141 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MMP7P09237 267 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CLUP10909 449 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CD79AP11912 226 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 B4GALT1P15291 398 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF823P16415 610 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SPI1P17947 270 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SLC2A5P22732 501 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CRYGSP22914 178 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HTR1FP30939 366 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 FMO3P31513 532 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CAPGP40121 348 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 VHLP40337 213 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HSPA13P48723 471 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF83P51522 516 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PAX9P55771 341 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MTCP1P56278 107 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CDC42P60953 191 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PCBD1P61457 104 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HIST1H3AP68431 136 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ADARB1P78563 741 aaKnown RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CYCSP99999 105 aaKnown RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PSG4Q00888 419 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HSF2Q03933 536 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GLO1Q04760 184 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SCRN3Q0VDG4 424 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 TMED1Q13445 227 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 TNK1Q13470 666 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 IL18R1Q13478 541 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 APOFQ13790 326 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ENDOGQ14249 297 aaKnown RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PCK2Q16822 640 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GSG1Q2KHT4 349 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SNAI3Q3KNW1 292 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 KLHL12Q53G59 568 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 BEX5Q5H9J7 111 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 NCMAPQ5T1S8 102 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HIST2H3PS2Q5TEC6 136 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MEDAGQ5VYS4 303 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 NXNL2Q5VZ03 156 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 OR4A47Q6IF82 309 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM53Q6P2H8 277 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 UGT2A3Q6UWM9 527 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HIST2H3AQ71DI3 136 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SLC16A14Q7RTX9 510 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 NRARPQ7Z6K4 114 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MDP1Q86V88 176 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GID4Q8IVV7 300 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 LRRC18Q8N456 261 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PROKR2Q8NFJ6 384 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 BBS1Q8NFJ9 593 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 OR51L1Q8NGJ5 315 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 OR9Q1Q8NGQ5 310 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 RHOXF1Q8NHV9 184 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 FAM81AQ8TBF8 368 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 GTF3AQ92664 365 aaKnown RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CORO2AQ92828 525 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 NABP1Q96AH0 204 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 BSCL2Q96G97 398 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 Q96MT0 163 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms