RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 ISL1P61371 349 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 MERTKQ12866 999 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 TMED1Q13445 227 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 GPR50Q13585 617 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 GTF2H2Q13888 395 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 MEF2DQ14814 521 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 OPCMLQ14982 345 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 SPHARQ15513 63 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 CHI3L2Q15782 390 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ODF3L2Q3SX64 289 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 AGKQ53H12 422 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 SLC35D3Q5M8T2 416 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 GTF2H2CQ6P1K8 395 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 BTNL3Q6UXE8 466 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 RPS27LQ71UM5 84 aaKnown RBP2.97□□□□□ -1.93
VPS13B-208ENST00000521037 COX8CQ7Z4L0 72 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF554Q86TJ5 538 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 SPATA24Q86W54 205 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM219Q86XT9 240 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 SKA3Q8IX90 412 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 CTAGE3PQ8IX95 158 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 DYNAPQ8N1N2 210 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 GPR151Q8TDV0 419 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 RORBQ92753 470 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 MYDGFQ969H8 173 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ISOC1Q96CN7 298 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 CERS2Q96G23 380 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 TPD52L3Q96J77 140 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 OR2M2Q96R28 347 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 THTPAQ9BU02 230 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ALG12Q9BV10 488 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 CHRNA9Q9UGM1 479 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ANKRD61A6NGH8 418 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CLDN24A6NM45 220 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF99A8MXY4 864 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 H3BUX3 64 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CCL24O00175 119 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 HDAC3O15379 428 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF264O43296 627 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF208O43345 1280 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SYNGR1O43759 233 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PLIN3O60664 434 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PFDN1O60925 122 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 UGT2B17O75795 530 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 KRT33AO76009 404 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 OR4F21O95013 312 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SNAP29O95721 258 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 LY6G6CO95867 125 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 HCKP08631 526 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 MMP7P09237 267 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 UBTFL6P0CB48 400 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ZCCHC18P0CG32 403 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PSG1P11464 419 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PGAM1P18669 254 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PAICSP22234 425 aaKnown RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SPRP35270 261 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 TAGLN2P37802 199 aaKnown RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SLC1A6P48664 564 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CCR4P51679 360 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 NCBP2P52298 156 aaKnown RBP eCLIP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ATP12AP54707 1039 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PSMD4P55036 377 aaKnown RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ESRRGP62508 458 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 GNB2P62879 340 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 BLCAPP62952 87 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 MFGE8Q08431 387 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 KLRD1Q13241 179 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 MAPRE2Q15555 327 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF141Q15928 474 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 TATDN3Q17R31 274 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 GSG1Q2KHT4 349 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 GGTA1PQ4G0N0 100 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 GPAT3Q53EU6 434 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 THEM4Q5T1C6 240 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SLC27A4Q6P1M0 643 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 NIPAL3Q6P499 406 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 DHRS4L2Q6PKH6 230 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CORO6Q6QEF8 472 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 RFPL4BQ6ZWI9 263 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ARPINQ7Z6K5 226 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ERI1Q8IV48 349 aaKnown RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ODF3L1Q8IXM7 274 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 C20orf196Q8IYI0 205 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CLIP4Q8N3C7 705 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PACRGLQ8N7B6 248 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 LRTM2Q8N967 370 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CDRT4Q8N9R6 151 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 OR2T6Q8NHC8 308 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF420Q8TAQ5 688 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PHYHIPQ92561 330 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CDS1Q92903 461 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 HIST1H2ACQ93077 130 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 MCHR2Q969V1 340 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SLC41A3Q96GZ6 507 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 URM1Q9BTM9 101 aaKnown RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 VCX2Q9H322 139 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 OR51B6Q9H340 312 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ALG9Q9H6U8 611 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 EFCAB1Q9HAE3 211 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms