RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 OR14L1PQ8NHC6 308 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 KLHL13Q9P2N7 655 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 STARD10Q9Y365 291 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 VCANP13611 3396 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 RALGAPA1Q6GYQ0 2036 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 A0A087WZY1 265 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 SPTY2D1-AS1A0A0U1RR47 76 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 PHOX2AO14813 284 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 ATXN7O15265 892 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 SRSF10O75494 262 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 CLPSP04118 112 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 P2RY1P47900 373 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 MYBPHQ13203 477 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 FZD2Q14332 565 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 SLC22A25Q6T423 547 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 LGI3Q8N145 548 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZDHHC12Q96GR4 267 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 LHFPL6Q9Y693 200 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 CLDN17P56750 224 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 SSX2Q16385 188 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 THEM4Q5T1C6 240 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZNF695Q8IW36 515 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 WDFY1Q8IWB7 410 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 MRPL38Q96DV4 380 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 LRRC61Q9BV99 259 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 FBRSQ9HAH7 460 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 LANCL2Q9NS86 450 aa11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 MCTS1Q9ULC4 181 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-208ENST00000520857 PMS2P1A4D2B8 440 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 SSSCA1O60232 199 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 TSPAN2O60636 221 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 TRGC2P03986 189 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 FOLR1P15328 257 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 EPHA1P21709 976 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 DLK1P80370 383 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 HGFACQ04756 655 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR52M1Q8NGK5 317 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR11L1Q8NGX0 322 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 GABRG3Q99928 467 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 MOB1AQ9H8S9 216 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 WFDC1Q9HC57 220 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 NECAP2Q9NVZ3 263 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 SMCO3A2RU48 225 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 NPIPB7O75200 414 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 CTSDP07339 412 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 HIST2H3PS2Q5TEC6 136 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 OPA3Q9H6K4 179 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 LRFN1Q9P244 771 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 ANXA10Q9UJ72 324 aa11.26□□□□□ -0.61
TRAPPC9-208ENST00000520857 TGIF2-C20orf24A0A0A6YYL0 155 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 SLC34A2O95436 690 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 GABRA4P48169 554 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 TLE1Q04724 770 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZNF266Q14584 549 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR1N1Q8NGS0 311 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 TAAR9Q96RI9 348 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 EGLN1Q9GZT9 426 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 NAA60Q9H7X0 242 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 GNG13Q9P2W3 67 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 TLCD2A6NGC4 264 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 H3BP45 60 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 LINC01565O15544 149 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 F10P00742 488 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 APOBEC1P41238 236 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 ALDH3B1P43353 468 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 GAMTQ14353 236 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 CYB561D1Q8N8Q1 229 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 NKX2-4Q9H2Z4 354 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 IGKV3-11P04433 115 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 CCL20P78556 96 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 SURF2Q15527 256 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 SPNS3Q6ZMD2 512 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 TUBA4BQ9H853 241 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 LMAN1LQ9HAT1 526 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 HS3ST3A1Q9Y663 406 aa11.25□□□□□ -0.61
TRAPPC9-208ENST00000520857 A0A087X0M5 115 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 A0A1B0GX30 115 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR7C1O76099 320 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 HOXA5P20719 270 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 ATP6V0CP27449 155 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 GPX4P36969 197 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 NOVA1P51513 510 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 RUNX1Q01196 453 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 GPR157Q5UAW9 335 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms