RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ETV3LQ6ZN32 361 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 CHMP1BQ7LBR1 199 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 SSX9Q7RTT3 188 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 ABHD12BQ7Z5M8 362 aaPredicted RBP4.4□□□□□ -1.71
SDC2-204ENST00000519914 ZNF100Q8IYN0 542 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 GVQW1Q8N7I0 195 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 ZNF283Q8N7M2 679 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 LINC00482Q8N8I6 264 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 ZIC4Q8N9L1 334 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 TMEM104Q8NE00 496 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 SLC30A7Q8NEW0 376 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 OR4S1Q8NGB4 309 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 OR9K2Q8NGE7 335 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 OR2Y1Q8NGV0 311 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 OR4K15Q8NH41 348 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 IFI44Q8TCB0 444 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 THAP3Q8WTV1 239 aaPredicted RBP4.4□□□□□ -1.71
SDC2-204ENST00000519914 PPP1R1CQ8WVI7 109 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 NUDCD2Q8WVJ2 157 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 KCNE4Q8WWG9 221 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 HAS2Q92819 552 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 EMG1Q92979 244 aaKnown RBP4.4□□□□□ -1.71
SDC2-204ENST00000519914 TMEM230Q96A57 120 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 CMBLQ96DG6 245 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 RAB3CQ96E17 227 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 ADGRG7Q96K78 797 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 SGCZQ96LD1 299 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 CXorf58Q96LI9 332 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 DMRTA2Q96SC8 542 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 PIGQQ9BRB3 760 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 NICN1Q9BSH3 213 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 SOX7Q9BT81 388 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 GPR61Q9BZJ8 451 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 OR10A2Q9H208 303 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 C5orf66Q9H5L9 145 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 UNKLQ9H9P5 680 aaKnown RBP4.4□□□□□ -1.71
SDC2-204ENST00000519914 TMEM100Q9NV29 134 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 TREM2Q9NZC2 230 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 IL36GQ9NZH8 169 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 COMMD9Q9P000 198 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 DNAJB11Q9UBS4 358 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 ZNF230Q9UIE0 474 aaPredicted RBP4.4□□□□□ -1.71
SDC2-204ENST00000519914 HSF4Q9ULV5 492 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 POLR1DQ9Y2S0 133 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 NOP16Q9Y3C1 178 aaKnown RBP4.4□□□□□ -1.71
SDC2-204ENST00000519914 HS3ST3B1Q9Y662 390 aa4.4□□□□□ -1.71
SDC2-204ENST00000519914 NCKAP5O14513 1909 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 A0A0J9YW62 118 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 KANTRA0A1W2PQU2 76 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PMS2P1A4D2B8 440 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 OR6C6A6NF89 314 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 TMEM210A6NLX4 147 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 LINC00587B1AMM8 73 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 C9J4A7 227 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 E9PLN8 166 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SLC31A2O15432 143 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SOCS1O15524 211 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 RAD51DO75771 328 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 MPIG6BO95866 241 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 RLN2P04090 185 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 IFNA6P05013 189 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SERPINA5P05154 406 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 KLK3P07288 261 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 ZNF883P0CG24 379 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 CCL3P10147 92 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 CD79AP11912 226 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SELLP14151 372 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ANOS1P23352 680 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 CPT2P23786 658 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 DTYMKP23919 212 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PAX6P26367 422 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PSMB6P28072 239 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 DLSTP36957 453 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 RFC3P40938 356 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PCP4P48539 62 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 DHPSP49366 369 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 PRKXP51817 358 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ATP1B3P54709 279 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 CLDN17P56750 224 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PPIAP62937 165 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 SUPT4H1P63272 117 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 IL13RA1P78552 427 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 OC90Q02509 493 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 RAB35Q15286 201 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 TAF13Q15543 124 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 KISS1Q15726 138 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 UBE2V2Q15819 145 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SCGB2B2Q4G0G5 96 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PAN3Q58A45 887 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 TRIM61Q5EBN2 209 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PHYHD1Q5SRE7 291 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SAPCD1Q5SSQ6 148 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 AADACL3Q5VUY0 350 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ALKAL2Q6UX46 152 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 DRAM2Q6UX65 266 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 FAM57BQ71RH2 274 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 RNF144BQ7Z419 303 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 TMED4Q7Z7H5 227 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ZNF101Q8IZC7 436 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms