RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	ZNF322	Q6U7Q0	402 aa	Predicted RBP	0.51	□□□□□ -2.33
PCM1-208	ENST00000518877		Q6ZQT7	251 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	NDUFAF7	Q7L592	441 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	APRG1	Q8IVJ8	170 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	HS3ST5	Q8IZT8	346 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	RPRML	Q8N4K4	120 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	DNAAF3	Q8N9W5	541 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	OR4K2	Q8NGD2	314 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	ITFG1	Q8TB96	612 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	CA5BP1	Q8WTZ4	195 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	MRPL48	Q96GC5	212 aa	Known RBP	0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	CCDC77	Q9BR77	488 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	API5	Q9BZZ5	524 aa	Known RBP	0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	GABARAPL1	Q9H0R8	117 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	ELOVL6	Q9H5J4	265 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	ASB7	Q9H672	318 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	KIR3DX1	Q9H7L2	352 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	JCAD	Q9P266	1359 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	CCL26	Q9Y258	94 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	KLF12	Q9Y4X4	402 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	TRAPPC1	Q9Y5R8	145 aa		0.51	□□□□□ -2.33
PCM1-208	ENST00000518877	AHNAK	Q09666	5890 aa	Known RBP	0.51	□□□□□ -2.33
PCM1-208	ENST00000518877		K7EPK0	472 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	MYL12B	O14950	172 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	SLC31A1	O15431	190 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	CACNG3	O60359	315 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	WBP4	O75554	376 aa	Known RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	RHOC	P08134	193 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	OR4Q2	P0C623	313 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	RPS5	P46782	204 aa	Known RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	ZNF140	P52738	457 aa	Predicted RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	SLC18A1	P54219	525 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	SLC35A1	P78382	337 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	RPL18A	Q02543	176 aa	Known RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	PMVK	Q15126	192 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	C5orf64	Q2M2E5	130 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	EPGN	Q6UW88	154 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	EIF3M	Q7L2H7	374 aa	Known RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	VTCN1	Q7Z7D3	282 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	TMEM25	Q86YD3	366 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	CPNE9	Q8IYJ1	553 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	SLC7A5P1	Q8MH63	180 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	APOBEC3D	Q96AK3	386 aa	Predicted RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	RCN3	Q96D15	328 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	GSDMA	Q96QA5	445 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	CHP1	Q99653	195 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	BPIFA3	Q9BQP9	254 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	TSSK6	Q9BXA6	273 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	FAM192A	Q9GZU8	254 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	TUBA4B	Q9H853	241 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	LYRM4	Q9HD34	91 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	C20orf96	Q9NUD7	363 aa	Predicted RBP	0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	AHSP	Q9NZD4	102 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	TBC1D24	Q9ULP9	559 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	SAR1B	Q9Y6B6	198 aa		0.5	□□□□□ -2.33
PCM1-208	ENST00000518877	MALRD1	Q5VYJ5	2156 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	AK9	Q5TCS8	1911 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877		A6NED7	52 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877		F5H5P2	479 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	MPHOSPH10	O00566	681 aa	Known RBP	0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	TRDMT1	O14717	391 aa	Known RBP	0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	XRCC2	O43543	280 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	UPK1B	O75841	260 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	S1PR2	O95136	353 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	TTC4	O95801	387 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	PTHLH	P12272	177 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	MTPN	P58546	118 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	RPL10A	P62906	217 aa	Known RBP	0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	SPANXN2	Q5MJ10	180 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	TTC19	Q6DKK2	380 aa	Predicted RBP	0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	NOXRED1	Q6NXP6	359 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	FAM231D	Q6ZW35	169 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	CENPQ	Q7L2Z9	268 aa	Predicted RBP	0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	SCX	Q7RTU7	201 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	LUZP2	Q86TE4	346 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	TRAM1L1	Q8N609	369 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	CCDC148	Q8NFR7	591 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	OR2V1	Q8NHB1	315 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	TMEM234	Q8WY98	164 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	MAL2	Q969L2	176 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	MCUR1	Q96AQ8	359 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	C20orf144	Q9BQM9	153 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	TXNDC17	Q9BRA2	123 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	CD209	Q9NNX6	404 aa		0.49	□□□□□ -2.33
PCM1-208	ENST00000518877	CACNA1S	Q13698	1873 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	TRAV8-4	A0A0B4J246	113 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	ZNF860	A6NHJ4	632 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	C17orf98	A8MV24	154 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	ZNF99	A8MXY4	864 aa	Predicted RBP	0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	DNAJB6	O75190	326 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	ZNF189	O75820	626 aa	Predicted RBP	0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	OR2A4	O95047	310 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	SNX4	O95219	450 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877		P01737	135 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	GPR1	P46091	355 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	ST3GAL4	Q11206	333 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	CLEC19A	Q6UXS0	136 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	MARCH3	Q86UD3	253 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	C3orf22	Q8N5N4	141 aa		0.48	□□□□□ -2.33
PCM1-208	ENST00000518877	BPIFB6	Q8NFQ5	453 aa		0.48	□□□□□ -2.33

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms