RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C1orf147Q96MC9 270 aaPredicted RBP11.26□□□□□ -0.61
SMAD1-215ENST00000515385 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 ZFYVE21Q9BQ24 234 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 FAM206AQ9NX38 181 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 P4HTMQ9NXG6 502 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 SLC17A4Q9Y2C5 497 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 B4E171 279 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 TTRP02766 147 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CEACAM1P13688 526 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CCR2P41597 374 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 ALDH3B1P43353 468 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 COL10A1Q03692 680 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 AGBL4Q5VU57 503 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 OTPQ5XKR4 325 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 TMEFF1Q8IYR6 380 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 RNF133Q8WVZ7 376 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 BOD1Q96IK1 185 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 C18orf12Q96KH6 178 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CCDC3Q9BQI4 270 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 ZNF2Q9BSG1 426 aaPredicted RBP11.26□□□□□ -0.61
SMAD1-215ENST00000515385 NAA60Q9H7X0 242 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 MBNL1Q9NR56 388 aaKnown RBP11.26□□□□□ -0.61
SMAD1-215ENST00000515385 COA3Q9Y2R0 106 aaPredicted RBP11.26□□□□□ -0.61
SMAD1-215ENST00000515385 FANCMQ8IYD8 2048 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 MED19A0JLT2 244 aaPredicted RBP11.25□□□□□ -0.61
SMAD1-215ENST00000515385 H0YGG7 62 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 SCDO00767 359 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 CEACAM5P06731 702 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 ADH5P11766 374 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 FGF5P12034 268 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 GALNSP34059 522 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 ARF3P61204 181 aaPredicted RBP11.25□□□□□ -0.61
SMAD1-215ENST00000515385 LGI3Q8N145 548 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 FLVCR1-AS1Q8TAF5 88 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 MRGPRDQ8TDS7 321 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 NPRL2Q8WTW4 380 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 P2RX4Q99571 388 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 PBOV1Q9GZY1 135 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 MOB1AQ9H8S9 216 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
SMAD1-215ENST00000515385 CBLN4Q9NTU7 201 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
SMAD1-215ENST00000515385 IL17BQ9UHF5 180 aa11.25□□□□□ -0.61
SMAD1-215ENST00000515385 RCL1Q9Y2P8 373 aaKnown RBP11.25□□□□□ -0.61
SMAD1-215ENST00000515385 MRPS2Q9Y399 296 aaKnown RBP11.25□□□□□ -0.61
SMAD1-215ENST00000515385 BLACEA4D250 179 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 LINC01553A4QN01 128 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 ZNF878C9JN71 531 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 ETV2O00321 342 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 XRCC2O43543 280 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 DXOO77932 396 aaKnown RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 FAM90A2PQ658T7 463 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 ZNF774Q6NX45 483 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 PRSS41Q7RTY9 318 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 TMEM170AQ8WVE7 144 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 ABHD14BQ96IU4 210 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 PLEKHF2Q9H8W4 249 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 GPR173Q9NS66 373 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 HSF4Q9ULV5 492 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 SCN3AQ9NY46 2000 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 MANSC4A6NHS7 340 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 FOXI3A8MTJ6 420 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 OR4A8P0C604 315 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 PGA3P0DJD8 388 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 BCKDHBP21953 392 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 CTGFP29279 349 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 OR10J1P30954 320 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 FAM3BP58499 235 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 PRDX4Q13162 271 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 CD226Q15762 336 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 P4HA3Q7Z4N8 544 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 MRPL41Q8IXM3 137 aaKnown RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 MAML2Q8IZL2 1156 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 FAM185AQ8N0U4 392 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 OR51T1Q8NGJ9 327 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 DAZLQ92904 295 aaKnown RBP11.24□□□□□ -0.61
SMAD1-215ENST00000515385 SLC46A1Q96NT5 459 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 GAL3ST4Q96RP7 486 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 PECRQ9BY49 303 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 BANF2Q9H503 90 aa11.24□□□□□ -0.61
SMAD1-215ENST00000515385 BMI1P35226 326 aa11.23□□□□□ -0.61
SMAD1-215ENST00000515385 IDH3GP51553 393 aaPredicted RBP11.23□□□□□ -0.61
SMAD1-215ENST00000515385 MTCP1P56278 107 aa11.23□□□□□ -0.61
SMAD1-215ENST00000515385 PIGPP57054 158 aa11.23□□□□□ -0.61
SMAD1-215ENST00000515385 ABCA11PQ4W5N1 156 aa11.23□□□□□ -0.61
SMAD1-215ENST00000515385 TEX38Q6PEX7 206 aa11.23□□□□□ -0.61
SMAD1-215ENST00000515385 LILRA6Q6PI73 481 aa11.23□□□□□ -0.61
SMAD1-215ENST00000515385 FBXO46Q6PJ61 603 aaPredicted RBP11.23□□□□□ -0.61
SMAD1-215ENST00000515385 OR5AS1Q8N127 324 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms