RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GHRLQ9UBU3 117 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 IGKV1-12A0A0C4DH73 117 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 TRAPPC2LH3BP13 241 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 NDUFS8O00217 210 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 ANGPTL7O43827 346 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 TMEM127O75204 238 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 KDM4BO94953 1096 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 IGKV1D-12P01611 117 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 UBBP0CG47 229 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 RPS19P39019 145 aaKnown RBP17.64■□□□□ 0.41
LSM6-207ENST00000515311 RAB11BQ15907 218 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 AWAT2Q6E213 333 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 CLEC2AQ6UVW9 174 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 DNM1P46Q6ZS02 220 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 C1QL2Q7Z5L3 287 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 PEG10Q86TG7 708 aaKnown RBP17.64■□□□□ 0.41
LSM6-207ENST00000515311 CROCCP3Q8IVE0 287 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 NDNFQ8TB73 568 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 S100A13Q99584 98 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 DCSTAMPQ9H295 470 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 HES4Q9HCC6 221 aa17.64■□□□□ 0.41
LSM6-207ENST00000515311 RSL24D1Q9UHA3 163 aaKnown RBP17.64■□□□□ 0.41
LSM6-207ENST00000515311 SMIM30A4D0T7 59 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 CCDC160A6NGH7 325 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.63■□□□□ 0.41
LSM6-207ENST00000515311 AKR7A2O43488 359 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 ZNF780AO75290 641 aaPredicted RBP17.63■□□□□ 0.41
LSM6-207ENST00000515311 CLEC2LP0C7M8 214 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 HNRNPA0Q13151 305 aaKnown RBP17.63■□□□□ 0.41
LSM6-207ENST00000515311 GPR176Q14439 515 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 RSU1Q15404 277 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 SFXN4Q6P4A7 337 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 PRSS57Q6UWY2 283 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 FAM90A1Q86YD7 464 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 Q8NFD4 153 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 SLC25A28Q96A46 364 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 SLC25A46Q96AG3 418 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 C12orf43Q96C57 262 aaKnown RBP17.63■□□□□ 0.41
LSM6-207ENST00000515311 TIMD4Q96H15 378 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 C1orf147Q96MC9 270 aaPredicted RBP17.63■□□□□ 0.41
LSM6-207ENST00000515311 ZNF488Q96MN9 340 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 METTL9Q9H1A3 318 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 STEAP1Q9UHE8 339 aa17.63■□□□□ 0.41
LSM6-207ENST00000515311 NXPH2O95156 264 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 BPNT1O95861 308 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 EGR1P18146 543 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 BCL3P20749 454 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 GLRA1P23415 457 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 NPBWR2P48146 333 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 BMXP51813 675 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 CAPZA1P52907 286 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 SPCS2Q15005 226 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 CARTPTQ16568 116 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 SMIM21Q3B7S5 101 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 ELP2Q6IA86 826 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 GLIPR1L1Q6UWM5 242 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 FAM168AQ92567 244 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 RAB1CQ92928 201 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 FOXC2Q99958 501 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 BATF3Q9NR55 127 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 PCDHB16Q9NRJ7 776 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 ING4Q9UNL4 249 aa17.62■□□□□ 0.41
LSM6-207ENST00000515311 PPIAL4EA0A075B759 164 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 PPIAL4DF5H284 164 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 F8VVB4 439 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 F8VWA3 439 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 LGALS8O00214 317 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 WNT9BO14905 357 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 PPIHO43447 177 aaKnown RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 SFTPBP07988 381 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 PPIAL4FP0DN26 164 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 MUC1P15941 1255 aaPredicted RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 RBMXP38159 391 aaKnown RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 CAV3P56539 151 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 BTG1P62324 171 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 DGUOKQ16854 277 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 HES5Q5TA89 166 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 TEX36Q5VZQ5 186 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 BOLLQ8N9W6 283 aaKnown RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 C10orf105Q8TEF2 133 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 DGCR14Q96DF8 476 aaKnown RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 WDR13Q9H1Z4 485 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 ELL3Q9HB65 397 aaPredicted RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 RBFOX1Q9NWB1 397 aaKnown RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 PPIAL4AQ9Y536 164 aa17.61■□□□□ 0.41
LSM6-207ENST00000515311 SETXQ7Z333 2677 aaKnown RBP17.61■□□□□ 0.41
LSM6-207ENST00000515311 TRAV38-1A0A0B4J264 116 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 OOEPA6NGQ2 149 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 IGHV2-70P01814 119 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 ARSBP15848 533 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 CD80P33681 288 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 MDH2P40926 338 aaKnown RBP17.6■□□□□ 0.41
LSM6-207ENST00000515311 GPR6P46095 362 aaPredicted RBP17.6■□□□□ 0.41
LSM6-207ENST00000515311 ZMYND11Q15326 602 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 CLEC12BQ2HXU8 276 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 SLC22A6Q4U2R8 563 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 Q5PR19 223 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 FAM201AQ5SY85 155 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 ACP7Q6ZNF0 438 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 FAM58AQ8N1B3 248 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms