RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CD2P06729 351 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 PSG2P11465 335 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 CELP19835 753 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 GATA3P23771 443 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 POU3F4P49335 361 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 NPY4RP50391 375 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 ATPAF1Q5TC12 328 aaPredicted RBP11.6□□□□□ -0.55
USP46-209ENST00000514536 LHFPL2Q6ZUX7 228 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 SLC36A1Q7Z2H8 476 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 RNF144BQ7Z419 303 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 ANGPTL6Q8NI99 470 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 SLAMF9Q96A28 289 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 RFT1Q96AA3 541 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 PGLYRP3Q96LB9 341 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 OR5M11Q96RB7 305 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 NRIP2Q9BQI9 281 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 TMPRSS13Q9BYE2 586 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 SMURF1Q9HCE7 757 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 MTCH1Q9NZJ7 389 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 ARHGAP32A7KAX9 2087 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 LOC105371242A0A075B767 164 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 FCN3O75636 299 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 ALX3O95076 343 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
USP46-209ENST00000514536 SELLP14151 372 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 EEF1B2P24534 225 aaKnown RBP11.59□□□□□ -0.55
USP46-209ENST00000514536 SRP14P37108 136 aaKnown RBP11.59□□□□□ -0.55
USP46-209ENST00000514536 RPS11P62280 158 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP46-209ENST00000514536 IKZF1Q13422 519 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 SPHARQ15513 63 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 MED22Q15528 200 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 YIF1BQ5BJH7 314 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 ZNF788Q6ZQV5 615 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 RAB40AQ8WXH6 277 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 TMEM106AQ96A25 262 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 NEK6Q9HC98 313 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 TAS2R4Q9NYW5 299 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 LSM2Q9Y333 95 aaKnown RBP11.59□□□□□ -0.55
USP46-209ENST00000514536 INSIG2Q9Y5U4 225 aa11.59□□□□□ -0.55
USP46-209ENST00000514536 IGKV1D-17A0A075B6S4 117 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 RFPL4AA6NLU0 287 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 RFPL4AL1F8VTS6 287 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 F8VVB4 439 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 F8VWA3 439 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 J3QLI3 93 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 SPRY1O43609 319 aaPredicted RBP11.58□□□□□ -0.55
USP46-209ENST00000514536 NDUFB3O43676 98 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 SULT1B1O43704 296 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 HCKP08631 526 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 SRD5A1P18405 259 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 RAB3AP20336 220 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 ERVK11-1P61568 191 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 BDH1Q02338 343 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 PAX2Q02962 417 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 ACSM1Q08AH1 577 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 PDZK1IP1Q13113 114 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 SMIM21Q3B7S5 101 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 ASPHD2Q6ICH7 369 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.55
USP46-209ENST00000514536 PRSS48Q7RTY5 328 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 MKXQ8IYA7 352 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 ST8SIA4Q92187 359 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 ORAI1Q96D31 301 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 MED30Q96HR3 178 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 CEP19Q96LK0 163 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 GAFA1Q96PS6 74 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 NUDT16L1Q9BRJ7 211 aaKnown RBP11.58□□□□□ -0.55
USP46-209ENST00000514536 DNTTIP1Q9H147 329 aa11.58□□□□□ -0.55
USP46-209ENST00000514536 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 KIR2DS1A0A191URI9 304 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 NKX6-3A6NJ46 265 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 C22orf46C9J442 243 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 CYB5AP00167 134 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 CD1AP06126 327 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 FAM157CP0CG43 387 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 MAP2K4P45985 399 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 IL13RA1P78552 427 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 Q499Y3 187 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 CD276Q5ZPR3 534 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 CRIP3Q6Q6R5 217 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 BTNL3Q6UXE8 466 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 BTN2A1Q7KYR7 527 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 SATL1Q86VE3 508 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 OR51A2Q8NGJ7 313 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 HES4Q9HCC6 221 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 OR14J1Q9UGF5 321 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 OPN4Q9UHM6 478 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 ZNF222Q9UK12 451 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 BLOC1S6Q9UL45 172 aa11.58□□□□□ -0.56
USP46-209ENST00000514536 A0A1W2PPK0 400 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 SIGLEC5O15389 551 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 MAGEB3O15480 346 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 ANGPTL7O43827 346 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms