RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 RORCP51449 518 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 MXD1Q05195 221 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 MPPED2Q15777 294 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 FAM189A2Q15884 450 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 CARTPTQ16568 116 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 CTF1Q16619 201 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 MICBQ29980 383 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 AWAT2Q6E213 333 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 CLEC2AQ6UVW9 174 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 SLC25A26Q70HW3 274 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 PXT1Q8NFP0 134 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 OR6M1Q8NGM8 313 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 AQP3Q92482 292 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 RFT1Q96AA3 541 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 ISOC1Q96CN7 298 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 PERPQ96FX8 193 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 MRI1Q9BV20 369 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 CNTD2Q9H8S5 307 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 CHODLQ9H9P2 273 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 TMEM106BQ9NUM4 274 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
NEDD9-214ENST00000513989 FBN1P35555 2871 aaKnown RBP8.56□□□□□ -1.04
NEDD9-214ENST00000513989 IGKV1-27A0A075B6S5 117 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 DPPA5A6NC42 116 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 IFITM5A6NNB3 132 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 AIPO00170 330 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 NDUFS8O00217 210 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 SLC17A2O00624 439 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 PPIHO43447 177 aaKnown RBP8.56□□□□□ -1.04
NEDD9-214ENST00000513989 SSX4O60224 188 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 NOS1APO75052 506 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-214ENST00000513989 NCR1O76036 304 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 KDM4BO94953 1096 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 NXPH2O95156 264 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 BPNT1O95861 308 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 PLATP00750 562 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 CD37P11049 281 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 ARSBP15848 533 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 ADRA2CP18825 462 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 GLRA1P23415 457 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 RPS19P39019 145 aaKnown RBP8.56□□□□□ -1.04
NEDD9-214ENST00000513989 NCS1P62166 190 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 C1orf100Q5SVJ3 147 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 ASPHD2Q6ICH7 369 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 GLIPR1L1Q6UWM5 242 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 WDR82Q6UXN9 313 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 SLC16A12Q6ZSM3 486 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 CALHM1Q8IU99 346 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 C11orf53Q8IXP5 236 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 OR5D18Q8NGL1 313 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 TBC1D15Q8TC07 691 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 LRRC29Q8WV35 223 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 AP3S1Q92572 193 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 CEP19Q96LK0 163 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 NAA50Q9GZZ1 169 aaKnown RBP8.56□□□□□ -1.04
NEDD9-214ENST00000513989 CST11Q9H112 138 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 DCSTAMPQ9H295 470 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 RNF167Q9H6Y7 350 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 SMURF1Q9HCE7 757 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 TREM2Q9NZC2 230 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 DNAJB11Q9UBS4 358 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 STEAP1Q9UHE8 339 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 MRPS28Q9Y2Q9 187 aaKnown RBP8.56□□□□□ -1.04
NEDD9-214ENST00000513989 ABCA1O95477 2261 aa8.56□□□□□ -1.04
NEDD9-214ENST00000513989 PPIAL4EA0A075B759 164 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 PPIAL4DF5H284 164 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 SPRY1O43609 319 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-214ENST00000513989 NDUFA2O43678 99 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 FSTL3O95633 263 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 CYB5R3P00387 301 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-214ENST00000513989 LHBP01229 141 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 PPIAL4FP0DN26 164 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 GTF2F2P13984 249 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 MUC1P15941 1255 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-214ENST00000513989 PMELP40967 661 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 ZP1P60852 638 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 SMIM21Q3B7S5 101 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 SLC22A6Q4U2R8 563 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 IDNKQ5T6J7 187 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 SFXN4Q6P4A7 337 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 PRSS57Q6UWY2 283 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 ASCL4Q6XD76 172 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 ZNF826PQ6ZT77 177 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 Q71RC1 249 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-214ENST00000513989 WDR86Q86TI4 376 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 FAM90A1Q86YD7 464 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 FAM58AQ8N1B3 248 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 BOLLQ8N9W6 283 aaKnown RBP8.55□□□□□ -1.04
NEDD9-214ENST00000513989 POC1AQ8NBT0 407 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 KCNG3Q8TAE7 436 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 FAM168AQ92567 244 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 SLC25A46Q96AG3 418 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 FAM3DQ96BQ1 224 aa8.55□□□□□ -1.04
NEDD9-214ENST00000513989 C12orf43Q96C57 262 aaKnown RBP8.55□□□□□ -1.04
NEDD9-214ENST00000513989 MRPS24Q96EL2 167 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms