RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GTF2A1P52655 376 aaPredicted RBP8□□□□□ -1.13
RNF4-221ENST00000513643 IL13RA1P78552 427 aa8□□□□□ -1.13
RNF4-221ENST00000513643 XAF1Q6GPH4 301 aa8□□□□□ -1.13
RNF4-221ENST00000513643 METAP1DQ6UB28 335 aaPredicted RBP8□□□□□ -1.13
RNF4-221ENST00000513643 RNF144BQ7Z419 303 aa8□□□□□ -1.13
RNF4-221ENST00000513643 C11orf42Q8N5U0 333 aa8□□□□□ -1.13
RNF4-221ENST00000513643 KIR3DL3Q8N743 410 aa8□□□□□ -1.13
RNF4-221ENST00000513643 Q8N7P7 452 aa8□□□□□ -1.13
RNF4-221ENST00000513643 PNLDC1Q8NA58 520 aaKnown RBP8□□□□□ -1.13
RNF4-221ENST00000513643 SETD9Q8NE22 299 aa8□□□□□ -1.13
RNF4-221ENST00000513643 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
RNF4-221ENST00000513643 CYGBQ8WWM9 190 aa8□□□□□ -1.13
RNF4-221ENST00000513643 RGP1Q92546 391 aaPredicted RBP8□□□□□ -1.13
RNF4-221ENST00000513643 TNFRSF14Q92956 283 aa8□□□□□ -1.13
RNF4-221ENST00000513643 SPSB1Q96BD6 273 aa8□□□□□ -1.13
RNF4-221ENST00000513643 TMIGD2Q96BF3 282 aa8□□□□□ -1.13
RNF4-221ENST00000513643 FGGYQ96C11 551 aa8□□□□□ -1.13
RNF4-221ENST00000513643 ZNF488Q96MN9 340 aa8□□□□□ -1.13
RNF4-221ENST00000513643 WDFY2Q96P53 400 aa8□□□□□ -1.13
RNF4-221ENST00000513643 SLC6A7Q99884 636 aa8□□□□□ -1.13
RNF4-221ENST00000513643 C19orf24Q9BVV8 132 aa8□□□□□ -1.13
RNF4-221ENST00000513643 SUCNR1Q9BXA5 334 aa8□□□□□ -1.13
RNF4-221ENST00000513643 BABAM2Q9NXR7 383 aa8□□□□□ -1.13
RNF4-221ENST00000513643 CNOT2Q9NZN8 540 aaKnown RBP8□□□□□ -1.13
RNF4-221ENST00000513643 DNAJB11Q9UBS4 358 aa8□□□□□ -1.13
RNF4-221ENST00000513643 CLEC2DQ9UHP7 191 aa8□□□□□ -1.13
RNF4-221ENST00000513643 PSORS1C1Q9UIG5 152 aa8□□□□□ -1.13
RNF4-221ENST00000513643 SLC7A11Q9UPY5 501 aa8□□□□□ -1.13
RNF4-221ENST00000513643 SOX21Q9Y651 276 aaPredicted RBP8□□□□□ -1.13
RNF4-221ENST00000513643 KPTNQ9Y664 436 aa8□□□□□ -1.13
RNF4-221ENST00000513643 IGKV1-12A0A0C4DH73 117 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 CENPVL3A0A0U1RRI6 287 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 IRGMA1A4Y4 181 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 RFPL4AA6NLU0 287 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 RFPL4AL1F8VTS6 287 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 H3BSH0 61 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 CLDN34H7C241 214 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 NDUFB3O43676 98 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 ZNF737O75373 536 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 LALBAP00709 142 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 SERPINA3P01011 423 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 KNG1P01042 644 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 IGKV1D-12P01611 117 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 SFTPBP07988 381 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 CCDC159P0C7I6 412 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 PRKACBP22694 351 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 PRDX2P32119 198 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 COMPP49747 757 aaPredicted RBP7.99□□□□□ -1.13
RNF4-221ENST00000513643 GBX2P52951 348 aaPredicted RBP7.99□□□□□ -1.13
RNF4-221ENST00000513643 DOC2BQ14184 412 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 CDK5R1Q15078 307 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 LRRC10Q5BKY1 277 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 ARMCX4Q5H9R4 360 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 OR2G6Q5TZ20 316 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 RNLSQ5VYX0 342 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 DMKNQ6E0U4 476 aaPredicted RBP7.99□□□□□ -1.13
RNF4-221ENST00000513643 RPL22L1Q6P5R6 122 aaKnown RBP7.99□□□□□ -1.13
RNF4-221ENST00000513643 ZNRF1Q8ND25 227 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 OR52N1Q8NH53 320 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 FAM216AQ8WUB2 273 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 TMEM80Q96HE8 168 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 PDCD1LG2Q9BQ51 273 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 OCEL1Q9H607 264 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 SLC25A10Q9UBX3 287 aaPredicted RBP7.99□□□□□ -1.13
RNF4-221ENST00000513643 TRRAPQ9Y4A5 3859 aa7.99□□□□□ -1.13
RNF4-221ENST00000513643 FBN3Q75N90 2809 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 TRBV23-1A0A0A0MS06 115 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 FAM230AA0A1W2PPH8 454 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 EFCAB10A6NFE3 127 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 K7N7A8 449 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 GPX5O75715 221 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 TOX4O94842 621 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 AZGP1P25311 298 aaKnown RBP7.98□□□□□ -1.13
RNF4-221ENST00000513643 RBP2P50120 134 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 ZP1P60852 638 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 GMFBP60983 142 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 RPS11P62280 158 aaKnown RBP eCLIP7.98□□□□□ -1.13
RNF4-221ENST00000513643 ARF6P62330 175 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 ST3GAL4Q11206 333 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 PDZK1IP1Q13113 114 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 IKZF1Q13422 519 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 ZNF146Q15072 292 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 PDCD1Q15116 288 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 CNN3Q15417 329 aaKnown RBP7.98□□□□□ -1.13
RNF4-221ENST00000513643 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 SLC25A26Q70HW3 274 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 C8orf59Q8N0T1 100 aaPredicted RBP7.98□□□□□ -1.13
RNF4-221ENST00000513643 ZNF561Q8N587 486 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 ZNF676Q8N7Q3 588 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 SIGLECL1Q8N7X8 197 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 Q8NFD4 153 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 OR5AK2Q8NH90 309 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 C22orf15Q8WYQ4 148 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 ST8SIA4Q92187 359 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 BORCS8Q96FH0 119 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 CEP19Q96LK0 163 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 FAM234AQ9H0X4 552 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 ZCCHC4Q9H5U6 513 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 PLEKHA1Q9HB21 404 aa7.98□□□□□ -1.13
RNF4-221ENST00000513643 EXOSC1Q9Y3B2 195 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms