RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF780AO75290 641 aaPredicted RBP10.56□□□□□ -0.72
PDPN-210ENST00000513143 LHBP01229 141 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 SFTPBP07988 381 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 VSIG8P0DPA2 414 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 ARSBP15848 533 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 PAX1P15863 534 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 NPBWR2P48146 333 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 GPR176Q14439 515 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 RSU1Q15404 277 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 DGUOKQ16854 277 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 C2orf76Q3KRA6 126 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 ELP2Q6IA86 826 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 OR11L1Q8NGX0 322 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 LRRC29Q8WV35 223 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 ACOT12Q8WYK0 555 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 RDH5Q92781 318 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 HPS1Q92902 700 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 NRIP2Q9BQI9 281 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 ELL3Q9HB65 397 aaPredicted RBP10.56□□□□□ -0.72
PDPN-210ENST00000513143 DLL4Q9NR61 685 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 TREM2Q9NZC2 230 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 RNF7Q9UBF6 113 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 FBLN5Q9UBX5 448 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 OR5V1Q9UGF6 321 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 EDARQ9UNE0 448 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
PDPN-210ENST00000513143 ABCA12Q86UK0 2595 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 APCP25054 2843 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 TMEM14DPA8MWL7 114 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 SRRM5B3KS81 715 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 F8VVB4 439 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 F8VWA3 439 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 AKR7A2O43488 359 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 CDC14BO60729 498 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 RP2O75695 350 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 PAHP00439 452 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 IRF2P14316 349 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
PDPN-210ENST00000513143 DAOP14920 347 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 BCL3P20749 454 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 COL8A2P25067 703 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 HFEQ30201 348 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 SLC22A6Q4U2R8 563 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 OR2W3Q7Z3T1 314 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 Q8IYB0 196 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 C1orf87Q8N0U7 546 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 GCSAMQ8N6F7 178 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 AP3S1Q92572 193 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 CCL17Q92583 94 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 YIPF5Q969M3 257 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 ZNF488Q96MN9 340 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
PDPN-210ENST00000513143 HES4Q9HCC6 221 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 PCDHB16Q9NRJ7 776 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 SPATA2Q9UM82 520 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 PLEKHA6Q9Y2H5 1048 aa10.55□□□□□ -0.72
PDPN-210ENST00000513143 HECTD1Q9ULT8 2610 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 A0A075B6Q4 140 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 TMEM272A0A1B0GTI8 110 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 A0A1W2PP11 408 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 LYNX1G3V0Z9 82 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 TMEM178BH3BS89 294 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.54□□□□□ -0.72
PDPN-210ENST00000513143 LY6HO94772 140 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 HTR3BO95264 441 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
PDPN-210ENST00000513143 IGHV4-39P01824 125 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 CSTBP04080 98 aaKnown RBP10.54□□□□□ -0.72
PDPN-210ENST00000513143 LYNX1P0DP58 116 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 EGR1P18146 543 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 SERPINA2P20848 420 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 GLRA1P23415 457 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 RBMXP38159 391 aaKnown RBP10.54□□□□□ -0.72
PDPN-210ENST00000513143 BMXP51813 675 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 FGF12P61328 243 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 UNC119Q13432 240 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 ZNF404Q494X3 552 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 OR10K2Q6IF99 312 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 MZT2AQ6P582 158 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 CDH24Q86UP0 819 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 TMEM104Q8NE00 496 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 OR5H6Q8NGV6 325 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 OR10K1Q8NGX5 313 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 LGALS14Q8TCE9 139 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 PTX4Q96A99 478 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 GSX2Q9BZM3 304 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 CST11Q9H112 138 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 KCNK15Q9H427 330 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 RBFOX1Q9NWB1 397 aaKnown RBP10.54□□□□□ -0.72
PDPN-210ENST00000513143 DCAF16Q9NXF7 216 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 RASL12Q9NYN1 266 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 ETV7Q9Y603 341 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 NPTNQ9Y639 398 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 A3GALT2U3KPV4 340 aa10.54□□□□□ -0.72
PDPN-210ENST00000513143 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 WNT9BO14905 357 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms