RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 SLC2A1P11166 492 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 CD34P28906 385 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 NOS3P29474 1203 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 BMI1P35226 326 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 RAB9AP51151 201 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 LINC00205P59089 165 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 PRDX4Q13162 271 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 KRR1Q13601 381 aaKnown RBP7.03□□□□□ -1.28
CLCN3-208ENST00000512813 SCARB2Q14108 478 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 KLHL12Q53G59 568 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 LAX1Q8IWV1 398 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 Q8N9W7 124 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 SYT8Q8NBV8 401 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 OR2AJ1Q8NGZ0 328 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 ZNF671Q8TAW3 534 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 TOMM40LQ969M1 308 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 FLYWCH2Q96CP2 140 aaKnown RBP7.03□□□□□ -1.28
CLCN3-208ENST00000512813 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-208ENST00000512813 RNF170Q96K19 258 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 HRASLS5Q96KN8 279 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 HSPB9Q9BQS6 159 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 NMNAT1Q9HAN9 279 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-208ENST00000512813 PSMC3IPQ9P2W1 217 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-208ENST00000512813 SAR1BQ9Y6B6 198 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 COMMD3-BMI1R4GMX3 469 aa7.03□□□□□ -1.28
CLCN3-208ENST00000512813 IZUMO1RA6ND01 250 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 NCBP2LA6PVI3 153 aaKnown RBP7.02□□□□□ -1.29
CLCN3-208ENST00000512813 ZNF737O75373 536 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 IFNA4P05014 189 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 IL6P05231 212 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 LBPP18428 481 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 ALDH3A1P30838 453 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 GPR4P46093 362 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 TRIM25Q14258 630 aaKnown RBP7.02□□□□□ -1.29
CLCN3-208ENST00000512813 OGFOD2Q6N063 350 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 MSANTD1Q6ZTZ1 278 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 GDPD3Q7L5L3 318 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 ASCC1Q8N9N2 400 aaKnown RBP7.02□□□□□ -1.29
CLCN3-208ENST00000512813 POC1AQ8NBT0 407 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 SPATA4Q8NEY3 305 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 OR51A7Q8NH64 312 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 AQP3Q92482 292 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 RPEQ96AT9 228 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 BPIFA2Q96DR5 249 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 REEP6Q96HR9 211 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 MNTQ99583 582 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 GGTLC1Q9BX51 225 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 OR51I2Q9H344 312 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 TMEM38AQ9H6F2 299 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 ZNF286AQ9HBT8 521 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 AIG1Q9NVV5 245 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 SLC2A8Q9NY64 477 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 ETAA1Q9NY74 926 aa7.02□□□□□ -1.29
CLCN3-208ENST00000512813 VPS13BQ7Z7G8 4022 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 FAM172BPA6NC97 362 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 FAM183AA6NL82 134 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 OR11H12B2RN74 326 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 DCTN6O00399 190 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 HSPB1P04792 205 aaKnown RBP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 ABHD2P08910 425 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 TROVE2P10155 538 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 HOXB9P17482 250 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 CFL1P23528 166 aaKnown RBP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 GSK3AP49840 483 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 GPM6AP51674 278 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 EBI3Q14213 229 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 RBMS2Q15434 407 aaKnown RBP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 KRT71Q3SY84 523 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 SOHLH1Q5JUK2 328 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 C6orf10Q5SRN2 563 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 LRIF1Q5T3J3 769 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 DNM1P34Q6PK57 102 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 IL34Q6ZMJ4 242 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 CCDC80Q76M96 950 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 ADCK1Q86TW2 530 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 MICU2Q8IYU8 434 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 OR8H2Q8N162 312 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 Q8N6K4 173 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 TRMT10AQ8TBZ6 339 aaKnown RBP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 NDEL1Q9GZM8 345 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 MFFQ9GZY8 342 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 MRM2Q9UI43 246 aaKnown RBP7.01□□□□□ -1.29
CLCN3-208ENST00000512813 FBXL7Q9UJT9 491 aa7.01□□□□□ -1.29
CLCN3-208ENST00000512813 FAM90A10PA6NDY2 464 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 DLGAP1O14490 977 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 COPEO14579 308 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 TOR1AO14656 332 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 SPRY2O43597 315 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 MPZL2O60487 215 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 CST4P01036 141 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 CD7P09564 240 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 IFI30P13284 250 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 CRABP1P29762 137 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 GLIPR1P48060 266 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 PRKXP51817 358 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 PRRX1P54821 245 aa7□□□□□ -1.29
CLCN3-208ENST00000512813 EIF2B1Q14232 305 aaKnown RBP7□□□□□ -1.29
CLCN3-208ENST00000512813 RBM39Q14498 530 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms