RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 OR10V1Q8NGI7 309 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 OR13G1Q8NGZ3 307 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 C10orf35Q96D05 121 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 FAM96BQ9Y3D0 163 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 NDUFB3O43676 98 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 NQO2P16083 231 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 ZNRF4Q8WWF5 429 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 NEIL1Q96FI4 390 aaPredicted RBP11.09□□□□□ -0.63
COL11A1-210ENST00000512756 VSTM2LQ96N03 204 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 HES4Q9HCC6 221 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 ICAM5Q9UMF0 924 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 NXPH1P58417 271 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 ATP6V1FQ16864 119 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 C1orf53Q5VUE5 145 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 RHBDD2Q6NTF9 364 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 OR4D9Q8NGE8 314 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 STRCQ7RTU9 1775 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 RAB7AP51149 207 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 SSPNQ14714 243 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 NPEPL1Q8NDH3 523 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 ASB10Q8WXI3 467 aa11.09□□□□□ -0.63
COL11A1-210ENST00000512756 NXF2Q9GZY0 626 aaKnown RBP11.09□□□□□ -0.63
COL11A1-210ENST00000512756 SEMG1P04279 462 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 LPAR6P43657 344 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
COL11A1-210ENST00000512756 TMEM241Q24JQ0 296 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 CLEC12BQ2HXU8 276 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 HSBP1O75506 76 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 MICBQ29980 383 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 NHLRC1Q6VVB1 395 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 C20orf196Q8IYI0 205 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 FLRT3Q9NZU0 649 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 SCN1AP35498 2009 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 PSG6Q00889 435 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 B3GNTL1Q67FW5 361 aaPredicted RBP11.08□□□□□ -0.64
COL11A1-210ENST00000512756 PRR27Q6MZM9 219 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 OR10D3Q8NH80 312 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 RPS4Y2Q8TD47 263 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 ACY3Q96HD9 319 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 MPC1Q9Y5U8 109 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 ARL2-SNX15V9GYD0 113 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 COL9A1P20849 921 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 KIR2DS2P43631 304 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 CLEC9AQ6UXN8 241 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 OR4D11Q8NGI4 311 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
COL11A1-210ENST00000512756 MAP1LC3BQ9GZQ8 125 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 FAM60AQ9NP50 221 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 FBXL17Q9UF56 701 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 NEU3Q9UQ49 428 aa11.08□□□□□ -0.64
COL11A1-210ENST00000512756 IGHV1OR15-9A0A0B4J2B8 117 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 H3BMH7 237 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 PHOX2AO14813 284 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 TNFSF14O43557 240 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 RAC3P60763 192 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 OR2Z1Q8NG97 314 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 OR2T6Q8NHC8 308 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 SF3B5Q9BWJ5 86 aaKnown RBP11.07□□□□□ -0.64
COL11A1-210ENST00000512756 MYOZ1Q9NP98 299 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-210ENST00000512756 SLC45A2Q9UMX9 530 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 SLC31A2O15432 143 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 FGF2P09038 288 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 CA6P23280 308 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 IL24Q13007 206 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 MESTQ5EB52 335 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 IER2Q9BTL4 223 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 PECRQ9BY49 303 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 MIXL1Q9H2W2 232 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 TRAPPC1Q9Y5R8 145 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 OR5AC1P0C628 307 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 MLF1P58340 268 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 ZNF66Q6ZN08 573 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 DEFB123Q8N688 67 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 PTP4A1Q93096 173 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 MRPS18AQ9NVS2 196 aaKnown RBP11.07□□□□□ -0.64
COL11A1-210ENST00000512756 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 OR5H15A6NDH6 313 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 SPRY3O43610 288 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 PAX6P26367 422 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 EPHA8P29322 1005 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-210ENST00000512756 OR5I1Q13606 314 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 STUMQ69YW2 141 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 FRRS1LQ9P0K9 344 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
COL11A1-210ENST00000512756 J3QR89 54 aa11.06□□□□□ -0.64
COL11A1-210ENST00000512756 B3GALNT1O75752 331 aa11.06□□□□□ -0.64
COL11A1-210ENST00000512756 FAM3AP98173 230 aa11.06□□□□□ -0.64
COL11A1-210ENST00000512756 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
COL11A1-210ENST00000512756 PDCD1Q15116 288 aa11.06□□□□□ -0.64
COL11A1-210ENST00000512756 INPP5JQ15735 1006 aaPredicted RBP11.06□□□□□ -0.64
COL11A1-210ENST00000512756 IFT22Q9H7X7 185 aa11.06□□□□□ -0.64
COL11A1-210ENST00000512756 FAM24AA6NFZ4 105 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms