RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ZNF620Q6ZNG0 422 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SCD5Q86SK9 330 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 ZNF383Q8NA42 475 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 OR9G4Q8NGQ1 327 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 OR4S2Q8NH73 311 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 ZMAT3Q9HA38 289 aaKnown RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 RCE1Q9Y256 329 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 LOC105371242A0A075B767 164 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 H7C2G1 150 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 FFAR1O14842 300 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 LRP3O75074 770 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 HSBP1O75506 76 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 ZDHHC11BP0C7U3 371 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 ALOX5APP20292 161 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 FZD5Q13467 585 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 PCLAFQ15004 111 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 TMEM183AQ8IXX5 376 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 CA13Q8N1Q1 262 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 GDPD1Q8N9F7 314 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 GEMIN7Q9H840 131 aaKnown RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 FOXD3Q9UJU5 478 aaPredicted RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 CHST1O43916 411 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 CST4P01036 141 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 MAS1LP35410 378 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 HTR6P50406 440 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 C3orf36Q3SXR2 165 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 DUX3Q96PT4 197 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 OR2D2Q9H210 308 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 TMEM140Q9NV12 185 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 MIOXQ9UGB7 285 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 FER1L4A9Z1Z3 1794 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 IGHV3OR15-7A0A075B7D8 119 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 CDS2O95674 445 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 KRTDAPP60985 99 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.13
VCAN-208ENST00000512590 SRSF4Q08170 494 aaKnown RBP7.96□□□□□ -1.13
VCAN-208ENST00000512590 ZIC5Q96T25 663 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 VPS25Q9BRG1 176 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 KCNK15Q9H427 330 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 MSL2Q9HCI7 577 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 LRRIQ1Q96JM4 1722 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 ZNF727A8MUV8 499 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 SNAP29O95721 258 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 ATF1P18846 271 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 ZNF56Q15929 161 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 Q6ZPB1 254 aaPredicted RBP7.96□□□□□ -1.13
VCAN-208ENST00000512590 ZNF502Q8TBZ5 544 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 SFRP2Q96HF1 295 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 KAZALD1Q96I82 304 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 TSPAN32Q96QS1 320 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 GORASP2Q9H8Y8 452 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 CSNK1G1Q9HCP0 422 aa7.96□□□□□ -1.13
VCAN-208ENST00000512590 PRRT4C9JH25 899 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 UPK1AO00322 258 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 CLPSP04118 112 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 NME1P15531 152 aaKnown RBP7.96□□□□□ -1.14
VCAN-208ENST00000512590 GMPRP36959 345 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 LPAR6P43657 344 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 PJVKQ0ZLH3 352 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 ANKRD37Q7Z713 158 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 ARL6IP6Q8N6S5 226 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 LFNGQ8NES3 379 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 MMP28Q9H239 520 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 LHX3Q9UBR4 397 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 ADGRB1O14514 1584 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 PIK3C2BO00750 1634 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 IGHV3-21A0A0B4J1V1 117 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 AQP8O94778 261 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 S1PR2O95136 353 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 GAPDHP04406 335 aaKnown RBP7.96□□□□□ -1.14
VCAN-208ENST00000512590 HAGHQ16775 308 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 SPINK9Q5DT21 86 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 OR4A5Q8NH83 315 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 RBPMSQ93062 196 aaKnown RBP7.96□□□□□ -1.14
VCAN-208ENST00000512590 BIRC8Q96P09 236 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 MS4A8Q9BY19 250 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 DAPP1Q9UN19 280 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 ETV7Q9Y603 341 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 M0R2Z0 102 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 CCL2P13500 99 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 CD80P33681 288 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 DIO1P49895 249 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 TMEM255BQ8WV15 326 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 NTNG2Q96CW9 530 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 OR2A5Q96R48 311 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 LINC01587Q99440 93 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 SLC25A33Q9BSK2 321 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 STYXL1Q9Y6J8 313 aa7.96□□□□□ -1.14
VCAN-208ENST00000512590 SPTY2D1-AS1A0A0U1RR47 76 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 IFNL4K9M1U5 179 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 NKX2-2O95096 273 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 DNAL4O96015 105 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 RD3LP0DJH9 198 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 RPS4Y1P22090 263 aaKnown RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 CDAP32320 146 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GNG4P50150 75 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 METAP1P53582 386 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 ZNF121P58317 390 aaPredicted RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 RIGQ13278 110 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GCSAMLQ5JQS6 135 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms