RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PLSCR5A0PG75 271 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 CRYBA1P05813 215 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 ADH4P08319 380 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 PIGPP57054 158 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 DRAM2Q6UX65 266 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 TGIF2LXQ8IUE1 241 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 ADAMTS17Q8TE56 1095 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 PINX1Q96BK5 328 aaKnown RBP9.72□□□□□ -0.85
CPNE4-209ENST00000512055 MMP26Q9NRE1 261 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 H0YIG0 161 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 PEBP1P30086 187 aaKnown RBP9.72□□□□□ -0.85
CPNE4-209ENST00000512055 CSNK1A1P48729 337 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 HES3Q5TGS1 186 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 FDX2Q6P4F2 183 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
CPNE4-209ENST00000512055 FGF20Q9NP95 211 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-209ENST00000512055 A0A0B4J293 547 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 IGKV1-8A0A0C4DH67 115 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 LOC100289279A0A1B0GTE1 492 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 IGHG1P01857 330 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 MELTFP08582 738 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 FBP1P09467 338 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 RPL18Q07020 188 aaKnown RBP9.71□□□□□ -0.85
CPNE4-209ENST00000512055 TPBGQ13641 420 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 ABHD17BQ5VST6 288 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 ADGRE4PQ86SQ3 457 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 CCDC190Q86UF4 302 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 GALNT16Q8N428 558 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 RAB24Q969Q5 203 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 CDC42EP2O14613 210 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 PRICKLE4Q2TBC4 344 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 HLA-DRB5Q30154 266 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 MRM1Q6IN84 353 aaKnown RBP9.71□□□□□ -0.85
CPNE4-209ENST00000512055 ZNF343Q6P1L6 599 aa9.71□□□□□ -0.85
CPNE4-209ENST00000512055 ADAT3Q96EY9 351 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-209ENST00000512055 FAM186AA6NE01 2351 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 OR5B21A6NL26 309 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 LRRC37A2A6NM11 1700 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 B4DEV8 164 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 MGAMO43451 1857 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 CHRM2P08172 466 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 TCN2P20062 427 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 MNX1P50219 401 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-209ENST00000512055 MVDP53602 400 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 CLDN20P56880 219 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 TUSC5Q8IXB3 177 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 LRRC18Q8N456 261 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 EPOPA6NHQ4 379 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF93P35789 620 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-209ENST00000512055 NMUP48645 174 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF85Q03923 595 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 CDC20Q12834 499 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 OR2W3Q7Z3T1 314 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 SLC22A24Q8N4F4 322 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 LHFPL5Q8TAF8 219 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 SLC35B3Q9H1N7 401 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 MUTYHQ9UIF7 546 aa9.71□□□□□ -0.86
CPNE4-209ENST00000512055 COA3Q9Y2R0 106 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-209ENST00000512055 RNASE1P07998 156 aaKnown RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 DDTP30046 118 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 NPBWR2P48146 333 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 HERVK_113P61574 105 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF346Q9UL40 294 aaKnown RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 PATJQ8NI35 1801 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 LOC102725191A0A1B0GVB3 256 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 DIRC3C9JPN6 131 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 F5H697 171 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 SLC35A1P78382 337 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 NPSR1Q6W5P4 371 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 LINC00469Q8N7U9 141 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 RTN4IP1Q8WWV3 396 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 TECRQ9NZ01 308 aaKnown RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 A0A1W2PN81 502 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 GCM2O75603 506 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 NKX2-2O95096 273 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 OR4E1P0C645 316 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 CLDN17P56750 224 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 CD81P60033 236 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 MUC15Q8N387 334 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 CTSFQ9UBX1 484 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 SCN5AQ14524 2016 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 MED19A0JLT2 244 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 H3BP45 60 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 CYB5R3P00387 301 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 CSF3P09919 207 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF250P15622 560 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 FCARP24071 287 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 SUB1P53999 127 aaKnown RBP eCLIP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 AWAT1Q58HT5 328 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 SLC35D3Q5M8T2 416 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 ASCL4Q6XD76 172 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 DND1Q8IYX4 353 aaKnown RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 OR5D13Q8NGL4 314 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 OR4C16Q8NGL9 310 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 SIGLEC7Q9Y286 467 aa9.7□□□□□ -0.86
CPNE4-209ENST00000512055 DIDO1Q9BTC0 2240 aaKnown RBP9.7□□□□□ -0.86
CPNE4-209ENST00000512055 GDF1P27539 372 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms