RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SIGLEC5O15389 551 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SNAPC5O75971 98 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 TXNDC12O95881 172 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 GYPAP02724 150 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MELTFP08582 738 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SNRNP70P08621 437 aaKnown RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 CALRP27797 417 aaKnown RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR1E2P47887 323 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 IDH3AP50213 366 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SUB1P53999 127 aaKnown RBP eCLIP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 APOC4P55056 127 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 F2RL1P55085 397 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 FOXA1P55317 472 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 LMO4P61968 165 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SPOCK1Q08629 439 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 IL13RA2Q14627 380 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 KIR2DS1Q14954 304 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 RPS26P11Q5JNZ5 115 aaPredicted RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 ATAD3CQ5T2N8 411 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 STEAP3Q658P3 488 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 PLXDC2Q6UX71 529 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 LINGO2Q7L985 606 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF695Q8IW36 515 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SAXO1Q8IYX7 474 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 C11orf42Q8N5U0 333 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR10H4Q8NGA5 316 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR4Q3Q8NH05 313 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 C15orf40Q8WUR7 153 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 PELI1Q96FA3 418 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 RNF5Q99942 180 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SMR3AQ99954 134 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 C9orf16Q9BUW7 83 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SAR1AQ9NR31 198 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 B3GNT2Q9NY97 397 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 VSX1Q9NZR4 365 aaPredicted RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 RHCGQ9UBD6 479 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OPN4Q9UHM6 478 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SLC22A13Q9Y226 551 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 GSTK1Q9Y2Q3 226 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 U3KQK5 164 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 DOCK7Q96N67 2140 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 JMJD1CQ15652 2540 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MEIKINA0A087WXM9 373 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 F5H5P2 479 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MS4A18H0YCH9 400 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SLC22A1O15245 554 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 NPIPB7O75200 414 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 DHRS3O75911 302 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 CLPTM1O96005 669 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 FAM153BP0C7A2 387 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR2T7P0C7T2 308 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MYL9P24844 172 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 PSMA1P25786 263 aaKnown RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 ZFP36P26651 326 aaKnown RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 ECI1P42126 302 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MVDP53602 400 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 PSG7Q13046 419 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM41BQ5BJD5 291 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 DMRTC1Q5HYR2 192 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SLC35F1Q5T1Q4 408 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 RBPMS2Q6ZRY4 209 aaKnown RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 VMO1Q7Z5L0 202 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SERPINA12Q8IW75 414 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR6T1Q8NGN1 323 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR8J1Q8NGP2 316 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 OR13C3Q8NGS6 347 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 LILRB1Q8NHL6 650 aaPredicted RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 CHAC2Q8WUX2 184 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MARC2Q969Z3 335 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 RNFT2Q96EX2 444 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MBOAT4Q96T53 435 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 CCL13Q99616 98 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 DCUN1D5Q9BTE7 237 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 AICDAQ9GZX7 198 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 SEBOXQ9HB31 216 aaPredicted RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 MEPEQ9NQ76 525 aaPredicted RBP2.38□□□□□ -2.03
CLOCK-209ENST00000511124 FLRT3Q9NZU0 649 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 GMEB1Q9Y692 573 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 ANK2Q01484 3957 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF292O60281 2723 aa2.38□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM212A6NML5 194 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SEC14L6B5MCN3 397 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 LDLRAD4O15165 306 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 RGS10O43665 173 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GSTZ1O43708 216 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 CHST1O43916 411 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PIAS1O75925 651 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 UBOX5O94941 541 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR2F2O95006 317 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 HTR3BO95264 441 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 MPIG6BO95866 241 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 C1QCP02747 245 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ACAA1P09110 424 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ASAH2BP0C7U1 165 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GTF2F2P13984 249 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ACKR3P25106 362 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 DUSP1P28562 367 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 KIR3DL2P43630 455 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 KIR2DS2P43631 304 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms