RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 LEPROTL1O95214 131 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 MUC1P15941 1255 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 SMPD1P17405 629 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 FUT1P19526 365 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 MPLP40238 635 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 ADCYAP1R1P41586 468 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 HINT1P49773 126 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 DAPP51397 102 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 UCP3P55916 312 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 KLRB1Q12918 225 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 FZD5Q13467 585 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 IZUMO4Q1ZYL8 232 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 VAX1Q5SQQ9 334 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 SYPL2Q5VXT5 272 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 FAHD1Q6P587 224 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 LCN15Q6UWW0 184 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 C9orf40Q8IXQ3 194 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 Q8IYB0 196 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 ZNF687Q8N1G0 1237 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 OR10AD1Q8NGE0 317 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 FGF14Q92915 247 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 C10orf35Q96D05 121 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 SMIM19Q96E16 107 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NUS1Q96E22 293 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 BARX1Q9HBU1 254 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 GALPQ9UBC7 116 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 KLHDC2Q9Y2U9 406 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 ENTPD2Q9Y5L3 495 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 A0A1W2PRS3 328 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 G3V2L1 256 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TNFSF13O75888 250 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 PPP1R3DO95685 299 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 CFDP00746 253 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 FURINP09958 794 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 CLEC2LP0C7M8 214 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 C1QTNF9P0C862 333 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 VPREB1P12018 145 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NMUP48645 174 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 FMODQ06828 376 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TMEM176BQ3YBM2 270 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 FKBP1CQ5VVH2 108 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NCBP2-AS2Q69YL0 99 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 WDTC1Q8N5D0 677 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 SMIM20Q8N5G0 67 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 BADQ92934 168 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 MRPS24Q96EL2 167 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 C20orf173Q96LM9 149 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TOX2Q96NM4 488 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 HIST1H4GQ99525 98 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 CDCA3Q99618 268 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 PDCD1LG2Q9BQ51 273 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 PAAF1Q9BRP4 392 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 SFXN3Q9BWM7 321 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 MEGF9Q9H1U4 602 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NPDC1Q9NQX5 325 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 WNT16Q9UBV4 365 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 GABRQQ9UN88 632 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 ANKRD31Q8N7Z5 1873 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 hADV38S2A0JD32 116 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NKX6-3A6NJ46 265 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 SLC17A2O00624 439 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 LDLRAD4O15165 306 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NXPH2O95156 264 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TRACP01848 142 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 SEMG1P04279 462 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TBC1D3HP0C7X1 549 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 BCL2P10415 239 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 BLVRBP30043 206 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 CTSCP53634 463 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 RBM11P57052 281 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 RPL27P61353 136 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 RPS15P62841 145 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 SLC25A11Q02978 314 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 CCSMST1Q4G0I0 132 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 UTF1Q5T230 341 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 PUSL1Q8N0Z8 303 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 TTC9BQ8N6N2 239 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 CELF5Q8N6W0 485 aaKnown RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 OR10G4Q8NGN3 311 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TMEM45BQ96B21 275 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 ZNF689Q96CS4 500 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 ALG14Q96F25 216 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 PRR11Q96HE9 360 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 TMEM56Q96MV1 263 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 HHIPQ96QV1 700 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 OR8B2Q96RD0 313 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 C1QTNF3Q9BXJ4 246 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 GPR62Q9BZJ7 368 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 PDZD7Q9H5P4 517 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 IKZF5Q9H5V7 419 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 IL23AQ9NPF7 189 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 ANKRD10Q9NXR5 420 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 FUT9Q9Y231 359 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.21□□□□□ -1.9
USP53-205ENST00000509769 OR5B21A6NL26 309 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 A8MXK9 166 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 OGG1O15527 345 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 GPX5O75715 221 aa3.21□□□□□ -1.9
USP53-205ENST00000509769 NTN1O95631 604 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms