RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 POLDIP2Q9Y2S7 368 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 FAM230AA0A1W2PPH8 454 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 EEF1B2P24534 225 aaKnown RBP14.65□□□□□ -0.06
TPM3-220ENST00000509601 ALDH3A2P51648 485 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 CAPZA1P52907 286 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 RPL15P61313 204 aaKnown RBP14.65□□□□□ -0.06
TPM3-220ENST00000509601 IL24Q13007 206 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 TMEM200BQ69YZ2 307 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 FAM185AQ8N0U4 392 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 CCDC54Q8NEL0 328 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 OR4F5Q8NH21 305 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 TRMT10AQ8TBZ6 339 aaKnown RBP14.65□□□□□ -0.06
TPM3-220ENST00000509601 RNFT2Q96EX2 444 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 DPAGT1Q9H3H5 408 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 SLC7A11Q9UPY5 501 aa14.65□□□□□ -0.06
TPM3-220ENST00000509601 CAB39Q9Y376 341 aaPredicted RBP14.65□□□□□ -0.06
TPM3-220ENST00000509601 CLPSL1A2RUU4 121 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 NXPH2O95156 264 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 FBP1P09467 338 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 GABRB1P18505 474 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 FUT6P51993 359 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 KRTAP10-3P60369 221 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 ERVFRD-1P60508 538 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 BLMHQ13867 455 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 OLFML2AQ68BL7 652 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 NCR3LG1Q68D85 454 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 ZFP1Q6P2D0 407 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 CCDC121Q6ZUS5 278 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 CBR4Q8N4T8 237 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 OR4M1Q8NGD0 313 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 OR2G2Q8NGZ5 317 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 C17orf50Q8WW18 174 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 MBOAT4Q96T53 435 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 SLC29A1Q99808 456 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 ADI1Q9BV57 179 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 CHST5Q9GZS9 411 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 OR14J1Q9UGF5 321 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 GNG8Q9UK08 70 aa14.64□□□□□ -0.07
TPM3-220ENST00000509601 EXOGQ9Y2C4 368 aaKnown RBP14.64□□□□□ -0.07
TPM3-220ENST00000509601 MEIOCA2RUB1 952 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 H0YAE9 185 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 KNG1P01042 644 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 TK1P04183 234 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 SAA4P35542 130 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 OR12D2P58182 307 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 NANOS3P60323 173 aaKnown RBP14.63□□□□□ -0.07
TPM3-220ENST00000509601 RPL31P62899 125 aaKnown RBP14.63□□□□□ -0.07
TPM3-220ENST00000509601 ACSM1Q08AH1 577 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 MEDAGQ5VYS4 303 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 FDX2Q6P4F2 183 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 KCTD20Q7Z5Y7 419 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 MKXQ8IYA7 352 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 ZSCAN4Q8NAM6 433 aaPredicted RBP14.63□□□□□ -0.07
TPM3-220ENST00000509601 OR5D13Q8NGL4 314 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 LINC01006Q8NI28 216 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 ADAT3Q96EY9 351 aaPredicted RBP14.63□□□□□ -0.07
TPM3-220ENST00000509601 IMPAD1Q9NX62 359 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 FRRS1LQ9P0K9 344 aa14.63□□□□□ -0.07
TPM3-220ENST00000509601 SF3B6Q9Y3B4 125 aaKnown RBP14.63□□□□□ -0.07
TPM3-220ENST00000509601 IGKV1-9A0A0C4DH69 117 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 LOC107986453A0A1B0GWG9 222 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 K7N7A8 449 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 SLC1A7O00341 560 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 Q6ZSV7 163 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 WFDC12Q8WWY7 111 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 C10orf35Q96D05 121 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 FAM234AQ9H0X4 552 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 PLEKHA1Q9HB21 404 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 ORC6Q9Y5N6 252 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 WNK1Q9H4A3 2382 aa14.62□□□□□ -0.07
TPM3-220ENST00000509601 DAPL1A0PJW8 107 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 SLC16A6O15403 523 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 ZNF737O75373 536 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 GATBO75879 557 aaKnown RBP14.61□□□□□ -0.07
TPM3-220ENST00000509601 INMTO95050 263 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 SERPINA3P01011 423 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 ISG15P05161 165 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 UBCP0CG48 685 aaKnown RBP14.61□□□□□ -0.07
TPM3-220ENST00000509601 CCL3L1P16619 93 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 DLX6P56179 175 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 COL10A1Q03692 680 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 ZNF273Q14593 569 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 TMEM244Q5VVB8 128 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 GDPGP1Q6ZNW5 385 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 FAM220AQ7Z4H9 259 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 BEND2Q8NDZ0 799 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 RHOXF1Q8NHV9 184 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 SLAMF9Q96A28 289 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 LGALS12Q96DT0 336 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 CEP19Q96LK0 163 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 CITED1Q99966 193 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 ZNF649Q9BS31 505 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 MEGF9Q9H1U4 602 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 S100A14Q9HCY8 104 aa14.61□□□□□ -0.07
TPM3-220ENST00000509601 CHRM2P08172 466 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 CCR9P51686 369 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 ACTC1P68032 377 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 ACTA1P68133 377 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 MIDNQ504T8 468 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 SLC25A26Q70HW3 274 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms