RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 A0A1B0GTI1 187 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 FAM230AA0A1W2PPH8 454 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 PQLC2LA1A4F0 135 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 H3BSH0 61 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 SRSF10O75494 262 aaKnown RBP12.52□□□□□ -0.41
TPM3-219ENST00000509409 INMTO95050 263 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 KRT8P05787 483 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 PIPP12273 146 aaPredicted RBP12.52□□□□□ -0.41
TPM3-219ENST00000509409 CCL3L1P16619 93 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 SLX4IPQ5VYV7 408 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 TMEM42Q69YG0 159 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 GID4Q8IVV7 300 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 ADI1Q9BV57 179 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 USE1Q9NZ43 259 aa12.52□□□□□ -0.41
TPM3-219ENST00000509409 WNK1Q9H4A3 2382 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 ZAR1LA6NP61 321 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 TK1P04183 234 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 FASP25445 335 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 EPHA2P29317 976 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 ATP6V1E1P36543 226 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 KIR2DS4P43632 304 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 BMXP51813 675 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 HERPUD1Q15011 391 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 ATP6AP1Q15904 470 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 C12orf73Q69YU5 71 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 ZNF782Q6ZMW2 699 aaPredicted RBP12.51□□□□□ -0.41
TPM3-219ENST00000509409 C1QL4Q86Z23 238 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
TPM3-219ENST00000509409 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 NKX3-1Q99801 234 aaPredicted RBP12.51□□□□□ -0.41
TPM3-219ENST00000509409 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 CADM1Q9BY67 442 aaKnown RBP12.51□□□□□ -0.41
TPM3-219ENST00000509409 PLEKHA1Q9HB21 404 aa12.51□□□□□ -0.41
TPM3-219ENST00000509409 VWFP04275 2813 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 METTL15A6NJ78 407 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 DHRS7CA6NNS2 312 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 SYT7O43581 403 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 CHRM2P08172 466 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 EDDM3BP56851 147 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 EFNB1P98172 346 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 COL10A1Q03692 680 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 ZNF273Q14593 569 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 AANATQ16613 207 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 PLA1AQ53H76 456 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 KDM4DQ6B0I6 523 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 AMIGO2Q86SJ2 522 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 AJUBAQ96IF1 538 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 PKIBQ9C010 78 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 WARS2Q9UGM6 360 aaKnown RBP12.5□□□□□ -0.41
TPM3-219ENST00000509409 ENOPH1Q9UHY7 261 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 FOXJ3Q9UPW0 622 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 AP4S1Q9Y587 144 aa12.5□□□□□ -0.41
TPM3-219ENST00000509409 K7N7A8 449 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 APOL3O95236 402 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 SERPINA3P01011 423 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 ARG1P05089 322 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 MPZP25189 248 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 IL24Q13007 206 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 C11orf88Q6PI97 169 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 SSX6Q7RTT6 188 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 C11orf42Q8N5U0 333 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 DTX3Q8N9I9 347 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 OR10H4Q8NGA5 316 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 OR13D1Q8NGV5 346 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 NPFFR1Q9GZQ6 430 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 HES4Q9HCC6 221 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 ABCB10Q9NRK6 738 aa12.49□□□□□ -0.41
TPM3-219ENST00000509409 A0A1W2PQL4 384 aaPredicted RBP12.48□□□□□ -0.41
TPM3-219ENST00000509409 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
TPM3-219ENST00000509409 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
TPM3-219ENST00000509409 OR2T7P0C7T2 308 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 VSIG10L2P0DP72 767 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 HTR1FP30939 366 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 FUT6P51993 359 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 EFNB2P52799 333 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 DYNC1I2Q13409 638 aaKnown RBP12.48□□□□□ -0.41
TPM3-219ENST00000509409 UBE2V2Q15819 145 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 FAM189A2Q15884 450 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 Q6ZSR3 168 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 GDPD3Q7L5L3 318 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 LHFPL4Q7Z7J7 247 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 CATSPERDQ86XM0 798 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 EGFL6Q8IUX8 553 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 KLHDC1Q8N7A1 406 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 SLAMF9Q96A28 289 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 BORCS8Q96FH0 119 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 CEP19Q96LK0 163 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 RIBC2Q9H4K1 309 aa12.48□□□□□ -0.41
TPM3-219ENST00000509409 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 DYNC1I1O14576 645 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 ZNF728P0DKX0 622 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 CCL1P22362 96 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 RASSF2P50749 326 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 RAB13P51153 203 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms