RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 QKIQ96PU8 341 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 PFDN5Q99471 154 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 ARHGDIGQ99819 225 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 ENY2Q9NPA8 101 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 IDI2-AS1Q9NZ38 188 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 ARMCX1Q9P291 453 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 OR12D3Q9UGF7 316 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 RAB22AQ9UL26 194 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 CARHSP1Q9Y2V2 147 aaKnown RBP3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 SIGLEC9Q9Y336 463 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 FAM32AQ9Y421 112 aaKnown RBP3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 ZBED9Q6R2W3 1325 aa3.39□□□□□ -1.87
SMARCA5-202ENST00000508573 TDRD15B5MCY1 1934 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 EXOC1LA0A1B0GW35 172 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SEMA4FO95754 770 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 EDN1P05305 212 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SERPINA7P05543 415 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 EIF4EP06730 217 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC35G6P0C7Q6 338 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 HSD17B1P14061 328 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CD99P14209 185 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 GABRA1P14867 456 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 GNB3P16520 340 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF708P17019 499 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 PSMB1P20618 241 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 OMGP23515 440 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 PAX6P26367 422 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 S100GP29377 79 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 S100A7P31151 101 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 DYNLL1P63167 89 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC7A9P82251 487 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 GINS1Q14691 196 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 RSU1Q15404 277 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 MICAQ29983 383 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 RPL13AP3Q6NVV1 102 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 ZFP1Q6P2D0 407 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 IGFL2Q6UWQ7 119 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CARM1Q86X55 608 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC35F6Q8N357 371 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CBR4Q8N4T8 237 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 NPWQ8N729 165 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 UBL4BQ8N7F7 174 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 ST6GALNAC3Q8NDV1 305 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 BLNKQ8WV28 456 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 TMED6Q8WW62 240 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 RXFP2Q8WXD0 754 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CHCHD10Q8WYQ3 142 aaPredicted RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 TMBIM1Q969X1 311 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 TAMM41Q96BW9 452 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 C12orf43Q96C57 262 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CNRIP1Q96F85 164 aaPredicted RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 BTF3L4Q96K17 158 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 C9orf85Q96MD7 179 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CMSS1Q9BQ75 279 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 GINS3Q9BRX5 216 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 EMC6Q9BV81 110 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SRXN1Q9BYN0 137 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC25A39Q9BZJ4 359 aaPredicted RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 NMNAT1Q9HAN9 279 aaPredicted RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SIX2Q9NPC8 291 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 RRAGDQ9NQL2 400 aaPredicted RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 OPTCQ9UBM4 332 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 SS18L2Q9UHA2 77 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 UTP11Q9Y3A2 253 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 LSM5Q9Y4Y9 91 aaKnown RBP3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 CCNB3Q8WWL7 1395 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 PALLDQ8WX93 1383 aa3.38□□□□□ -1.87
SMARCA5-202ENST00000508573 NCOA1Q15788 1441 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 POGZQ7Z3K3 1410 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 CNTLNQ9NXG0 1405 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 TRAV8-4A0A0B4J246 113 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 IGSF23A1L1A6 192 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 J3QT63 122 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 K7EQG2 157 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 NTN3O00634 580 aaPredicted RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 BHLHE40O14503 412 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 FGF17O60258 216 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 OR7C1O76099 320 aaPredicted RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 ATG12O94817 140 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 NXPH4O95158 308 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 MT-CO2P00403 227 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 P01737 135 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 C1GALT1C1LP0DN25 315 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 HIST1H1TP22492 207 aaPredicted RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 AK4P27144 223 aaPredicted RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 BTCP35070 178 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 SERPINB5P36952 375 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 CTRLP40313 264 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 GZMMP51124 257 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 CDC42P60953 191 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 RAB5BP61020 215 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 RAP1BP61224 184 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 PRDX1Q06830 199 aaKnown RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 CDK10Q15131 360 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 SURF2Q15527 256 aaPredicted RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 CCL14Q16627 93 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 UFSP1Q6NVU6 142 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 IDO2Q6ZQW0 420 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms