RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 C1orf122Q6ZSJ8 110 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 CMTM4Q8IZR5 234 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 POC1AQ8NBT0 407 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 LINC01006Q8NI28 216 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 ZNF671Q8TAW3 534 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 C17orf50Q8WW18 174 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 ITFG2Q969R8 447 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 SDSLQ96GA7 329 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 AJUBAQ96IF1 538 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 CITED1Q99966 193 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 GPR173Q9NS66 373 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 CLN6Q9NWW5 311 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 ENPP5Q9UJA9 477 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 OR52A1Q9UKL2 312 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 SLC22A13Q9Y226 551 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 PQLC2LA1A4F0 135 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 SLC22A31A6NKX4 558 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 LOC110117498-PIK3R3F6TDL0 507 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 M0R1W7 72 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 MTRF1O75570 445 aaKnown RBP13.25□□□□□ -0.29
LMNA-222ENST00000508500 CLIC3O95833 236 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 NRASP01111 189 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 PGA5P0DJD9 388 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 CEBPDP49716 269 aaPredicted RBP13.25□□□□□ -0.29
LMNA-222ENST00000508500 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 RPL15P61313 204 aaKnown RBP13.25□□□□□ -0.29
LMNA-222ENST00000508500 SNRPGP62308 76 aaKnown RBP13.25□□□□□ -0.29
LMNA-222ENST00000508500 OCLNQ16625 522 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 ZNF684Q5T5D7 378 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 Q6ZSV7 163 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 C11orf42Q8N5U0 333 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 TMEM185AQ8NFB2 350 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 OR51G2Q8NGK0 314 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 OR8J1Q8NGP2 316 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 RHOXF1Q8NHV9 184 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 NPRL2Q8WTW4 380 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 Q96MT0 163 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 TBX5Q99593 518 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 C19orf12Q9NSK7 152 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 PLCXD1Q9NUJ7 323 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 IMPAD1Q9NX62 359 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 H2AFY2Q9P0M6 372 aaPredicted RBP13.25□□□□□ -0.29
LMNA-222ENST00000508500 GTF2A1LQ9UNN4 478 aa13.25□□□□□ -0.29
LMNA-222ENST00000508500 KIAA2026Q5HYC2 2103 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 RFPL4AA6NLU0 287 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 ZNF670-ZNF695F2Z2N8 137 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 RFPL4AL1F8VTS6 287 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 NOS1APO75052 506 aaPredicted RBP13.24□□□□□ -0.29
LMNA-222ENST00000508500 APOL3O95236 402 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 FBP1P09467 338 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 CCL1P22362 96 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 SAA4P35542 130 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 HAAOP46952 286 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 EGR3Q06889 387 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 CLVS2Q5SYC1 327 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 BCL2L15Q5TBC7 163 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 MEDAGQ5VYS4 303 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 CALHM1Q8IU99 346 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 ZSCAN4Q8NAM6 433 aaPredicted RBP13.24□□□□□ -0.29
LMNA-222ENST00000508500 MNTQ99583 582 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 MOB1AQ9H8S9 216 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 RASL12Q9NYN1 266 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 TPRKBQ9Y3C4 175 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 FAM96BQ9Y3D0 163 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 RNF114Q9Y508 228 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 NOTCH1P46531 2555 aa13.24□□□□□ -0.29
LMNA-222ENST00000508500 A0A1W2PQ09 198 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 SNTNA6NMZ2 147 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 GABRB1P18505 474 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 UBE2E1P51965 193 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 PROK1P58294 105 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 ERVFRD-1P60508 538 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 BLMHQ13867 455 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 CATSPERDQ86XM0 798 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 ENTHD1Q8IYW4 607 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 RNF166Q96A37 237 aaPredicted RBP13.23□□□□□ -0.29
LMNA-222ENST00000508500 MRPS26Q9BYN8 205 aaKnown RBP13.23□□□□□ -0.29
LMNA-222ENST00000508500 DPAGT1Q9H3H5 408 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 METTL8Q9H825 291 aaKnown RBP13.23□□□□□ -0.29
LMNA-222ENST00000508500 HES4Q9HCC6 221 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
LMNA-222ENST00000508500 PRKDCP78527 4128 aaKnown RBP13.22□□□□□ -0.29
LMNA-222ENST00000508500 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
LMNA-222ENST00000508500 A0A087WXM4 84 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
LMNA-222ENST00000508500 MEIOCA2RUB1 952 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 MEGF11A6BM72 1044 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 TRIM64CA6NLI5 447 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 H3BSH0 61 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 J3QT63 122 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 CLPXO76031 633 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 RPP14O95059 124 aaKnown RBP13.22□□□□□ -0.29
LMNA-222ENST00000508500 MPZP25189 248 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 PAX6P26367 422 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 PRDX2P32119 198 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms