RNA–Protein interactions for RNA: ENST00000508394.6

SMUG1-215, Transcript of single-strand-selective monofunctional uracil-DNA glycosylase 1, human

APPRIS P1 TSL 2 BASIC

Gene SMUG1, Length 1,697 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMUG1-215	ENST00000508394	POC1A	Q8NBT0	407 aa		18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	OR5T2	Q8NGG2	359 aa		18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	CPNE2	Q96FN4	548 aa	Predicted RBP	18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	GFI1	Q99684	422 aa		18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	ELL3	Q9HB65	397 aa	Predicted RBP	18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	GSTK1	Q9Y2Q3	226 aa		18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	CR1	P17927	2039 aa		18.23	■□□□□ 0.51
SMUG1-215	ENST00000508394	CDRT1	O95170	752 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	BCL3	P20749	454 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	CFHR2	P36980	270 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	GPR107	Q5VW38	600 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	MKX	Q8IYA7	352 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	NKAIN3	Q8N8D7	197 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	CEP19	Q96LK0	163 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	GAL3ST1	Q99999	423 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	NAA50	Q9GZZ1	169 aa	Known RBP	18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	CNTD2	Q9H8S5	307 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	SMURF1	Q9HCE7	757 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	RBFOX1	Q9NWB1	397 aa	Known RBP	18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	DNAJB11	Q9UBS4	358 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	OOEP	A6NGQ2	149 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	NXPH2	O95156	264 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	TFF1	P04155	84 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	SLC25A16	P16260	332 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	PTGFR	P43088	359 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	RPL5	P46777	297 aa	Known RBP	18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	TIMM50	Q3ZCQ8	353 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	FAM90A1	Q86YD7	464 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	PNLDC1	Q8NA58	520 aa	Known RBP	18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	NRIP2	Q9BQI9	281 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	REG4	Q9BYZ8	158 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	TMEM165	Q9HC07	324 aa		18.22	■□□□□ 0.51
SMUG1-215	ENST00000508394	ABCA2	Q9BZC7	2435 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	MEGF11	A6BM72	1044 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	TRAPPC2L	H3BP13	241 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	LGALS8	O00214	317 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	GYPA	P02724	150 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	MDH2	P40926	338 aa	Known RBP	18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	SNU13	P55769	128 aa	Known RBP	18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	OR10A3	P58181	314 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	OR4D6	Q8NGJ1	314 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	OR10K1	Q8NGX5	313 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	KCTD7	Q96MP8	289 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	ING4	Q9UNL4	249 aa		18.21	■□□□□ 0.51
SMUG1-215	ENST00000508394	SFTPB	P07988	381 aa		18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	MXD1	Q05195	221 aa		18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	MICB	Q29980	383 aa		18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	GLT8D1	Q68CQ7	371 aa		18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	LRRC28	Q86X40	367 aa	Predicted RBP	18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	CIART	Q8N365	385 aa	Predicted RBP	18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	EMG1	Q92979	244 aa	Known RBP	18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	TMEM246	Q9BRR3	403 aa		18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	IL36RN	Q9UBH0	155 aa		18.2	■□□□□ 0.5
SMUG1-215	ENST00000508394	TRAV1-2	A0A0B4J238	106 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394		H7C1Q1	480 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	SMAD7	O15105	426 aa	Known RBP	18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	USF1	P22415	310 aa	Predicted RBP	18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	ZNF404	Q494X3	552 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	AWAT2	Q6E213	333 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	ACP7	Q6ZNF0	438 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	LYPD6	Q86Y78	171 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	CLDND2	Q8NHS1	167 aa		18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	MRPS28	Q9Y2Q9	187 aa	Known RBP	18.19	■□□□□ 0.5
SMUG1-215	ENST00000508394	TRAV38-1	A0A0B4J264	116 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	NOS1AP	O75052	506 aa	Predicted RBP	18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	IL2RG	P31785	369 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	SDC2	P34741	201 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	ERVK11-1	P61568	191 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	RSU1	Q15404	277 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	SMIM21	Q3B7S5	101 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	TEX36	Q5VZQ5	186 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	LYPD2	Q6UXB3	125 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	SLC16A12	Q6ZSM3	486 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	S100A13	Q99584	98 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	PLGRKT	Q9HBL7	147 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	NLK	Q9UBE8	527 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	OR14J1	Q9UGF5	321 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	PCDHB10	Q9UN67	800 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	HIVEP1	P15822	2718 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	DOCK11	Q5JSL3	2073 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394		A0A096LNT2	108 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	CEACAM18	A8MTB9	384 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	CLEC2L	P0C7M8	214 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	PRKACA	P17612	351 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	RAB3B	P20337	219 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	CEBPD	P49716	269 aa	Predicted RBP	18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	CAV3	P56539	151 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	VBP1	P61758	197 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	NCS1	P62166	190 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	SLC22A6	Q4U2R8	563 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	GLIPR1L1	Q6UWM5	242 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	GDPGP1	Q6ZNW5	385 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	NR2C2AP	Q86WQ0	139 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	MUC20	Q8N307	709 aa	Predicted RBP	18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	UQCC2	Q9BRT2	126 aa		18.18	■□□□□ 0.5
SMUG1-215	ENST00000508394	TLN2	Q9Y4G6	2542 aa		18.17	■□□□□ 0.5
SMUG1-215	ENST00000508394	YLPM1	P49750	1951 aa	Known RBP	18.17	■□□□□ 0.5
SMUG1-215	ENST00000508394		A0A1W2PP11	408 aa		18.17	■□□□□ 0.5
SMUG1-215	ENST00000508394	OR2AT4	A6NND4	320 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms