RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 IGKV1-27A0A075B6S5 117 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 TRBV23-1A0A0A0MS06 115 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 CLPSL1A2RUU4 121 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 F8VVB4 439 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 F8VWA3 439 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 H0YAE9 185 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 ENTPD6O75354 484 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 SULT1C4O75897 302 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 INMTO95050 263 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 PAX6P26367 422 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 UBE2E1P51965 193 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 KRTAP10-3P60369 221 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 CDC42P60953 191 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
RAB28-205ENST00000508274 ISL1P61371 349 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 ZIK1Q3SY52 487 aaPredicted RBP11.66□□□□□ -0.54
RAB28-205ENST00000508274 NCR3LG1Q68D85 454 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 MKXQ8IYA7 352 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 RDH10Q8IZV5 341 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 ZNF561Q8N587 486 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 VPREB3Q9UKI3 123 aa11.66□□□□□ -0.54
RAB28-205ENST00000508274 CAB39Q9Y376 341 aaPredicted RBP11.66□□□□□ -0.54
RAB28-205ENST00000508274 WNK1Q9H4A3 2382 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 LOC107986453A0A1B0GWG9 222 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 SLC1A7O00341 560 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 ANGPTL7O43827 346 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 PAHP00439 452 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 CCL3L1P16619 93 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 ERVK11-1P61568 191 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 RPL31P62899 125 aaKnown RBP11.65□□□□□ -0.54
RAB28-205ENST00000508274 IL24Q13007 206 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 BLMHQ13867 455 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 ZNF273Q14593 569 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 TMEM200BQ69YZ2 307 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 C17orf107Q6ZR85 190 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 LINC01006Q8NI28 216 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 RFKQ969G6 155 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 HRASLS5Q96KN8 279 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 PKIBQ9C010 78 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 IMPAD1Q9NX62 359 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 AASSQ9UDR5 926 aa11.65□□□□□ -0.54
RAB28-205ENST00000508274 MEX3AA1L020 520 aaKnown RBP11.64□□□□□ -0.55
RAB28-205ENST00000508274 WIPF1O43516 503 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 PIPP12273 146 aaPredicted RBP11.64□□□□□ -0.55
RAB28-205ENST00000508274 ACSM1Q08AH1 577 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 TMED1Q13445 227 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 Q6ZSV7 163 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 FAM220AQ7Z4H9 259 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 C11orf42Q8N5U0 333 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 OR5D13Q8NGL4 314 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 RNFT2Q96EX2 444 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 AJUBAQ96IF1 538 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 CITED1Q99966 193 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 CHST5Q9GZS9 411 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 SLC7A11Q9UPY5 501 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
RAB28-205ENST00000508274 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 E9PQ18 207 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 TK1P04183 234 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 BMXP51813 675 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 COL10A1Q03692 680 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 DHRS7BQ6IAN0 325 aaPredicted RBP11.63□□□□□ -0.55
RAB28-205ENST00000508274 GDPGP1Q6ZNW5 385 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 CBR4Q8N4T8 237 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 ASCC1Q8N9N2 400 aaKnown RBP11.63□□□□□ -0.55
RAB28-205ENST00000508274 ZSCAN4Q8NAM6 433 aaPredicted RBP11.63□□□□□ -0.55
RAB28-205ENST00000508274 ADAT3Q96EY9 351 aaPredicted RBP11.63□□□□□ -0.55
RAB28-205ENST00000508274 ADI1Q9BV57 179 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 USE1Q9NZ43 259 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 IL36RNQ9UBH0 155 aa11.63□□□□□ -0.55
RAB28-205ENST00000508274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.63□□□□□ -0.55
RAB28-205ENST00000508274 SF3B6Q9Y3B4 125 aaKnown RBP11.63□□□□□ -0.55
RAB28-205ENST00000508274 H3BUX3 64 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 J3QRE1 110 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 GATBO75879 557 aaKnown RBP11.62□□□□□ -0.55
RAB28-205ENST00000508274 UBCP0CG48 685 aaKnown RBP11.62□□□□□ -0.55
RAB28-205ENST00000508274 COX7A1P24310 79 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 ALDH3A2P51648 485 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 OR12D2P58182 307 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 PROK1P58294 105 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 NANOS3P60323 173 aaKnown RBP11.62□□□□□ -0.55
RAB28-205ENST00000508274 ZNF782Q6ZMW2 699 aaPredicted RBP11.62□□□□□ -0.55
RAB28-205ENST00000508274 SLC25A26Q70HW3 274 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 BEND2Q8NDZ0 799 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 TRUB1Q8WWH5 349 aaKnown RBP11.62□□□□□ -0.55
RAB28-205ENST00000508274 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 MBOAT4Q96T53 435 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 FRRS1LQ9P0K9 344 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 ORC6Q9Y5N6 252 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 IGKV1-9A0A0C4DH69 117 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 K7N7A8 449 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 KCNAB3O43448 404 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 ZNF737O75373 536 aa11.62□□□□□ -0.55
RAB28-205ENST00000508274 FUT6P51993 359 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms