RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 OR51M1Q9H341 326 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 FGF21Q9NSA1 209 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 LUZP4Q9P127 313 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 NXT1Q9UKK6 140 aaKnown RBP11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 ASCC3Q8N3C0 2202 aaKnown RBP11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 CABIN1Q9Y6J0 2220 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 IGHV1OR15-9A0A0B4J2B8 117 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 ZNF726A6NNF4 738 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 LMO7DNF2Z398 122 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 P2RY1P47900 373 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 PRSS12P56730 875 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 SLC35A1P78382 337 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 KCNMB1Q16558 191 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 RSPO1Q2MKA7 263 aaPredicted RBP11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 PHLDA2Q53GA4 152 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 PHYHD1Q5SRE7 291 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 FAM69BQ5VUD6 431 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 OGFOD3Q6PK18 319 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 BRICD5Q6PL45 260 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 HAS2Q92819 552 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 ZNF501Q96CX3 271 aaPredicted RBP11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 MARS2Q96GW9 593 aaKnown RBP11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 SPSB2Q99619 263 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 PIGQQ9BRB3 760 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 TINAGQ9UJW2 476 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 RCL1Q9Y2P8 373 aaKnown RBP11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 V9GYS6 101 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 SHANK1Q9Y566 2161 aa11.72□□□□□ -0.53
SNCAIP-209ENST00000508017 ADAMTS20P59510 1910 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 DHRS3O75911 302 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 PMELP40967 661 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 CLDN17P56750 224 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 CHAF1BQ13112 559 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 TSC22D1Q15714 1073 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 TAF9Q16594 264 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 SLC25A53Q5H9E4 307 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 TMEM182Q6ZP80 229 aaPredicted RBP11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 LRRC18Q8N456 261 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 SLC39A7Q92504 469 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 Q96M66 194 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 OXGR1Q96P68 337 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 BCL2L14Q9BZR8 327 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 CHST5Q9GZS9 411 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 NAA60Q9H7X0 242 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 METTL7AQ9H8H3 244 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
SNCAIP-209ENST00000508017 BORCS7-ASMTA0A0B4J1R7 106 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 FAM221AA4D161 298 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF850A8MQ14 1090 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 PPIHO43447 177 aaKnown RBP11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 GPR137BO60478 399 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 LMO1P25800 156 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 ECI1P42126 302 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 TMEM176BQ3YBM2 270 aaPredicted RBP11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 COMMD1Q8N668 190 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF565Q8N9K5 539 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 OR5L1Q8NGL2 311 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 AKR7LQ8NHP1 331 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 RTN4IP1Q8WWV3 396 aaPredicted RBP11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 RARRES2Q99969 163 aa11.71□□□□□ -0.54
SNCAIP-209ENST00000508017 AP4M1O00189 453 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 IGHV2-70P01814 119 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 RD3LP0DJH9 198 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF728P0DKX0 622 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 ENDOGQ14249 297 aaKnown RBP11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 NAXEQ8NCW5 288 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 OR11L1Q8NGX0 322 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 FAM213BQ8TBF2 198 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 RNF138Q8WVD3 245 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 LMAN1LQ9HAT1 526 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 KCNJ16Q9NPI9 418 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 PUS1Q9Y606 427 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 CA11O75493 328 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 HEXBP07686 556 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 EIF2S3P41091 472 aaKnown RBP11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 RPS23P62266 143 aaKnown RBP11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 ABCA11PQ4W5N1 156 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 PLXDC1Q8IUK5 500 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 OR1J1Q8NGS3 322 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
SNCAIP-209ENST00000508017 CCDC187A0A096LP49 1063 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 H7C1Q1 480 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 GPR37O15354 613 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 OR2J2O76002 312 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 CTSSP25774 331 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 S100PP25815 95 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 CD27P26842 260 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 CSNK1A1P48729 337 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 CCL20P78556 96 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 PPA1Q15181 289 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms