RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 BTN2A3PQ96KV6 586 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 KLF6Q99612 283 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 RHOXF2Q9BQY4 288 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 HDHD3Q9BSH5 251 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 PARP12Q9H0J9 701 aaKnown RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 GAL3ST2Q9H3Q3 398 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 SCML1Q9UN30 329 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 FLVCR2Q9UPI3 526 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 NEU3Q9UQ49 428 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 COQ4Q9Y3A0 265 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR51B4Q9Y5P0 310 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 FLNCQ14315 2725 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ARHGAP21Q5T5U3 1957 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 GOLGA4Q13439 2230 aaKnown RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 PLXNB3Q9ULL4 1909 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 SPTAN1Q13813 2472 aaKnown RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PLXNA2O75051 1894 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 TP53BP1Q12888 1972 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF638Q14966 1978 aaKnown RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 SPTY2D1-AS1A0A0U1RR47 76 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PLAC8L1A1L4L8 177 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 A6NDX4 124 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CENPXA8MT69 81 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 D6RAR5 112 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 NDUFS8O00217 210 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 AQP9O43315 295 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CDC40O60508 579 aaKnown RBP eCLIP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 RDH16O75452 317 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZMPSTE24O75844 475 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 SMC2O95347 1197 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGLV2-23P01705 113 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 IVLP07476 585 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ELK1P19419 428 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CSNK2A2P19784 350 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 RAB4AP20338 218 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CASQ1P31415 396 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CEACAM3P40198 252 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CXCL5P42830 114 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CCNG1P51959 295 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF121P58317 390 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PFN3P60673 137 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 LRRC63Q05C16 580 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CDH17Q12864 832 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ART3Q13508 389 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 EIF4EBP2Q13542 120 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 GABRA6Q16445 453 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF829Q3KNS6 432 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 LINC00303Q3SY05 128 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PIGGQ5H8A4 983 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 HES5Q5TA89 166 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 RWDD4Q6NW29 188 aaKnown RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 LYPD2Q6UXB3 125 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ABHD12BQ7Z5M8 362 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF429Q86V71 674 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM71AQ8IYT1 594 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 STPG2Q8N412 459 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 TRAM1L1Q8N609 369 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ASCC1Q8N9N2 400 aaKnown RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 Q8N9W7 124 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CHST4Q8NCG5 386 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR51G1Q8NGK1 321 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 CCL4L1Q8NHW4 92 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 JOSD2Q8TAC2 188 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR51E1Q8TCB6 317 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PATE1Q8WXA2 126 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 GALNT14Q96FL9 552 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM210BQ96KR6 192 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 BMFQ96LC9 184 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 COL21A1Q96P44 957 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 GPR21Q99679 349 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 SLC25A2Q9BXI2 301 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 SLC17A9Q9BYT1 436 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 HAUS4Q9H6D7 363 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PATZ1Q9HBE1 687 aaKnown RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 RDH14Q9HBH5 336 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 ISYNA1Q9NPH2 558 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 MRPL40Q9NQ50 206 aaKnown RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 RMND1Q9NWS8 449 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 SLC39A1Q9NY26 324 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 UVRAGQ9P2Y5 699 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 HS3ST2Q9Y278 367 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 FADS3Q9Y5Q0 445 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 KPTNQ9Y664 436 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 BOD1L1Q8NFC6 3051 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 TMEM131Q92545 1883 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 TEX15Q9BXT5 2789 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 PCNX2A6NKB5 2137 aa2.2□□□□□ -2.06
TRAPPC11-205ENST00000506426 AHCTF1Q8WYP5 2266 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NBASA2RRP1 2371 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGLV11-55A0A075B6I3 123 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGLV1-36A0A0B4J1U3 117 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 GOLGA6L4A6NEF3 574 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 SLC22A20A6NK97 555 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NCBP2LA6PVI3 153 aaKnown RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM166BA8MTA8 275 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 KLLNB2CW77 178 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 K7EMT4 169 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NME4O00746 187 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 KDELR3O43731 214 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms