RNA–Protein interactions for RNA: ENST00000504647.1

CUL9-208, Transcript of cullin 9, human

TSL 2

Gene CUL9, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL9-208	ENST00000504647	FAM230A	A0A1W2PPH8	454 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	METTL15	A6NJ78	407 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	SAC3D1	A6NKF1	404 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	SYT7	O43581	403 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	CLPX	O76031	633 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	ATP6V1E1	P36543	226 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	TGFBR2	P37173	567 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	ERVK11-1	P61568	191 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	MIDN	Q504T8	468 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	TMEM200B	Q69YZ2	307 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	MKX	Q8IYA7	352 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	BEND2	Q8NDZ0	799 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	OR4M1	Q8NGD0	313 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	C17orf50	Q8WW18	174 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	EME1	Q96AY2	570 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	OSBPL10	Q9BXB5	764 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	PKIB	Q9C010	78 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	C16orf95	Q9H693	158 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	PLEKHA1	Q9HB21	404 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647	SLC7A11	Q9UPY5	501 aa		12.82	□□□□□ -0.36
CUL9-208	ENST00000504647		A0A1W2PPH5	198 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	CIB2	O75838	187 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	SULT1C4	O75897	302 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	TSPAN9	O75954	239 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	TK1	P04183	234 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	CCL3L1	P16619	93 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	IL24	Q13007	206 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	TMED1	Q13445	227 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	UBE2V2	Q15819	145 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	C11orf42	Q8N5U0	333 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647	RFK	Q969G6	155 aa		12.81	□□□□□ -0.36
CUL9-208	ENST00000504647		H3BUX3	64 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647		M0QZ24	198 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	TIMM23	O14925	209 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	ERVFRD-1	P60508	538 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	CDC42	P60953	191 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	ZNF273	Q14593	569 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	OCLN	Q16625	522 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	PRSS35	Q8N3Z0	413 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	AJUBA	Q96IF1	538 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	SSX3	Q99909	188 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	RBM4B	Q9BQ04	359 aa	Known RBP	12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	ADI1	Q9BV57	179 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	PPA2	Q9H2U2	334 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	HEXA-AS1	Q9H8Q6	139 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	USE1	Q9NZ43	259 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	VWF	P04275	2813 aa		12.8	□□□□□ -0.36
CUL9-208	ENST00000504647	IGKV1-27	A0A075B6S5	117 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	hCG_1809904	A0A1W2PP81	198 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647		A0A1W2PPE2	198 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647		A0A1W2PR64	198 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647		A0A1W2PRV1	198 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647		F8VVB4	439 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647		F8VWA3	439 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	GATB	O75879	557 aa	Known RBP	12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	PIP	P12273	146 aa	Predicted RBP	12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	COX7A1	P24310	79 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	PAX6	P26367	422 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	FUT6	P51993	359 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	ISL1	P61371	349 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	COL10A1	Q03692	680 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	ZNF85	Q03923	595 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	TP53I3	Q53FA7	332 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	ASPHD2	Q6ICH7	369 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	SLC35E4	Q6ICL7	350 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	FAM220A	Q7Z4H9	259 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	ASCC1	Q8N9N2	400 aa	Known RBP	12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	CCDC54	Q8NEL0	328 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	PYDC1	Q8WXC3	89 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	UBE2F	Q969M7	185 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	CEP19	Q96LK0	163 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	CHST5	Q9GZS9	411 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	FAM234A	Q9H0X4	552 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	MEGF9	Q9H1U4	602 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	TCF7L1	Q9HCS4	588 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	MTCH1	Q9NZJ7	389 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	GNG8	Q9UK08	70 aa		12.79	□□□□□ -0.36
CUL9-208	ENST00000504647	CMYA5	Q8N3K9	4069 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	LOC107986453	A0A1B0GWG9	222 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647		K7N7A8	449 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	INMT	O95050	263 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	SERPINA3	P01011	423 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	UBC	P0CG48	685 aa	Known RBP	12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	KIR3DL2	P43630	455 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	BMX	P51813	675 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	DEFA6	Q01524	100 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	LY6E	Q16553	131 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	LRRC75B	Q2VPJ9	315 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	RDH10	Q8IZV5	341 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	TRUB1	Q8WWH5	349 aa	Known RBP	12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	SLAMF9	Q96A28	289 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	RNF166	Q96A37	237 aa	Predicted RBP	12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	BORCS8	Q96FH0	119 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	MMP27	Q9H306	513 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	IMPAD1	Q9NX62	359 aa		12.78	□□□□□ -0.36
CUL9-208	ENST00000504647	ZNF737	O75373	536 aa		12.77	□□□□□ -0.37
CUL9-208	ENST00000504647	ALPL	P05186	524 aa		12.77	□□□□□ -0.37
CUL9-208	ENST00000504647	CHRM2	P08172	466 aa		12.77	□□□□□ -0.37
CUL9-208	ENST00000504647	DLX6	P56179	175 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms