RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PNKDQ8N490 385 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 OR4M1Q8NGD0 313 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 OR51A4Q8NGJ6 313 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 RHOXF1Q8NHV9 184 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 CNIH3Q8TBE1 160 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
HOXC9-202ENST00000504557 RFT1Q96AA3 541 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 ADAT3Q96EY9 351 aaPredicted RBP11.73□□□□□ -0.53
HOXC9-202ENST00000504557 MRPL48Q96GC5 212 aaKnown RBP11.73□□□□□ -0.53
HOXC9-202ENST00000504557 CHST5Q9GZS9 411 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 RASL12Q9NYN1 266 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 ZNF222Q9UK12 451 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 KPTNQ9Y664 436 aa11.73□□□□□ -0.53
HOXC9-202ENST00000504557 H0YAE9 185 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 PIPP12273 146 aaPredicted RBP11.72□□□□□ -0.53
HOXC9-202ENST00000504557 OMGP23515 440 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 CFPP27918 469 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 PEX2P28328 305 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 FUT6P51993 359 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
HOXC9-202ENST00000504557 GALEQ14376 348 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 CNN3Q15417 329 aaKnown RBP11.72□□□□□ -0.53
HOXC9-202ENST00000504557 AWAT1Q58HT5 328 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 Q6ZSR3 168 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 KCTD20Q7Z5Y7 419 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 ASCC1Q8N9N2 400 aaKnown RBP11.72□□□□□ -0.53
HOXC9-202ENST00000504557 OR52I1Q8NGK6 324 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 SPACA5Q96QH8 159 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 NRIP2Q9BQI9 281 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 ERVK13-1Q9NX77 482 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 RPL36Q9Y3U8 105 aaKnown RBP11.72□□□□□ -0.53
HOXC9-202ENST00000504557 KIAA2026Q5HYC2 2103 aa11.72□□□□□ -0.53
HOXC9-202ENST00000504557 F8VVB4 439 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 F8VWA3 439 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 GPR37O15354 613 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
HOXC9-202ENST00000504557 RNASE1P07998 156 aaKnown RBP11.71□□□□□ -0.53
HOXC9-202ENST00000504557 AZGP1P25311 298 aaKnown RBP11.71□□□□□ -0.53
HOXC9-202ENST00000504557 ATP1B3P54709 279 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 MTCP1P56278 107 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 CAV3P56539 151 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 IL24Q13007 206 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 BLMHQ13867 455 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 EGFL6Q8IUX8 553 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 Q8N7P7 452 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 SDSLQ96GA7 329 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 CEP19Q96LK0 163 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 PKIBQ9C010 78 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 ZMAT3Q9HA38 289 aaKnown RBP11.71□□□□□ -0.53
HOXC9-202ENST00000504557 NEK6Q9HC98 313 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 MTCH1Q9NZJ7 389 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 HHLA2Q9UM44 414 aa11.71□□□□□ -0.53
HOXC9-202ENST00000504557 E9PI62 339 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 WBP4O75554 376 aaKnown RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 MELTFP08582 738 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 ATF1P18846 271 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 EEF1B2P24534 225 aaKnown RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 MPZP25189 248 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 DUSP1P28562 367 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 RBP2P50120 134 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 GBX2P52951 348 aaPredicted RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 BPIFB3P59826 476 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 RPL31P62899 125 aaKnown RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 COL10A1Q03692 680 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 RAB40BQ12829 278 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 C11orf91Q3C1V1 193 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 KLHL22Q53GT1 634 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 Q6YL49 198 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 ZNF561Q8N587 486 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 CCDC54Q8NEL0 328 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 OR5D18Q8NGL1 313 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 OR13C9Q8NGT0 318 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 C8orf46Q8TAG6 207 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 TSEN15Q8WW01 171 aaKnown RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 PP6455Q8WZ26 134 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 EMG1Q92979 244 aaKnown RBP11.7□□□□□ -0.54
HOXC9-202ENST00000504557 PDCD1LG2Q9BQ51 273 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 IL36RNQ9UBH0 155 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 TENM1Q9UKZ4 2725 aa11.7□□□□□ -0.54
HOXC9-202ENST00000504557 IGKV1-9A0A0C4DH69 117 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 MEIOCA2RUB1 952 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 FAM181BA6NEQ2 426 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 OR4C45A6NMZ5 311 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 NPFFO15130 113 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 ANGPTL7O43827 346 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 NOS1APO75052 506 aaPredicted RBP11.69□□□□□ -0.54
HOXC9-202ENST00000504557 CYB5AP00167 134 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 IGHV4-59P01825 116 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 IGHA1P01876 353 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 CRYBA1P05813 215 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 HKR1P10072 659 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 CCL3L1P16619 93 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms