RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	GP2	P55259	537 aa	Known RBP	13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	RIPPLY1	Q0D2K3	151 aa		13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ABCA11P	Q4W5N1	156 aa		13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	LINC01590	Q5TEZ4	76 aa		13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	LCN1P1	Q5VSP4	162 aa		13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	PLCXD3	Q63HM9	321 aa		13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	KCTD18	Q6PI47	426 aa	Predicted RBP	13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	OR14J1	Q9UGF5	321 aa		13.23	□□□□□ -0.29
SUPT20H-223	ENST00000497318	TENM2	Q9NT68	2774 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318		K7N7A8	449 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	NOS1AP	O75052	506 aa	Predicted RBP	13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	HTR1D	P28221	377 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	CEBPD	P49716	269 aa	Predicted RBP	13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	HMGA2	P52926	109 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	EDDM3B	P56851	147 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	PSMA6	P60900	246 aa	Known RBP	13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ACTA2	P62736	377 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ACTG2	P63267	376 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ACTC1	P68032	377 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ACTA1	P68133	377 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	CBX1	P83916	185 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	GDPD3	Q7L5L3	318 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	COMMD2	Q86X83	199 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	OSR2	Q8N2R0	312 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ASCC1	Q8N9N2	400 aa	Known RBP	13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	OR8B12	Q8NGG6	310 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	THEM6	Q8WUY1	208 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	TFAP2C	Q92754	450 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	OTULIN	Q96BN8	352 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ZNF488	Q96MN9	340 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ZNF714	Q96N38	554 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	OR8B4	Q96RC9	309 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	AMELY	Q99218	206 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	MED20	Q9H944	212 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ARMC1	Q9NVT9	282 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318		U3KQV3	271 aa		13.22	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ACOD1	A6NK06	481 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318		H0YHG0	523 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318		J3QT63	122 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318		M0QZK8	103 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	JUNB	P17275	347 aa	Predicted RBP	13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	MYCNOS	P40205	109 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	HAAO	P46952	286 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	THBS3	P49746	956 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	MS4A2	Q01362	244 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	MEF2C	Q06413	473 aa	Predicted RBP	13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ZNF684	Q5T5D7	378 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ZNF676	Q8N7Q3	588 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	AQP11	Q8NBQ7	271 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	OTOS	Q8NHW6	89 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	MUC7	Q8TAX7	377 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	NRIP2	Q9BQI9	281 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	CLEC7A	Q9BXN2	247 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	ARL2BP	Q9Y2Y0	163 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318	SESN1	Q9Y6P5	492 aa		13.21	□□□□□ -0.29
SUPT20H-223	ENST00000497318		A0A0U1RQV5	110 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	hADV38S2	A0JD32	116 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	PSMB11	A5LHX3	300 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	NUDT19	A8MXV4	375 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	ATP8B1	O43520	1251 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	OR2F2	O95006	317 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	CCNB2	O95067	398 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	MAGEA2	P43356	314 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	CASC10	Q5T4H9	136 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	C16orf89	Q6UX73	402 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	IQCF1	Q8N6M8	205 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	SLC25A33	Q9BSK2	321 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	ACTR3B	Q9P1U1	418 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	ENPP5	Q9UJA9	477 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	SLC22A13	Q9Y226	551 aa		13.2	□□□□□ -0.3
SUPT20H-223	ENST00000497318	IGHV2-26	A0A0B4J1V2	119 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	FAM183A	A6NL82	134 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318		B2RBV5	119 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	NRAS	P01111	189 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	RPL23A	P62750	156 aa	Known RBP	13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	DMRTC1	Q5HYR2	192 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	C9orf152	Q5JTZ5	239 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	PLBD1	Q6P4A8	553 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	ETV3L	Q6ZN32	361 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318		Q8NFD4	153 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	RBM14	Q96PK6	669 aa	Known RBP	13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	TMEM133	Q9H2Q1	129 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	CMC2	Q9NRP2	79 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	ZFP57	Q9NU63	452 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	DPM3	Q9P2X0	92 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	PIGL	Q9Y2B2	252 aa		13.19	□□□□□ -0.3
SUPT20H-223	ENST00000497318	BIRC6	Q9NR09	4857 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	C10orf99	Q6UWK7	81 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	KRT77	Q7Z794	578 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	BCAS4	Q8TDM0	211 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	NIPSNAP1	Q9BPW8	284 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	OR51V1	Q9H2C8	321 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	HES4	Q9HCC6	221 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	TAS2R1	Q9NYW7	299 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	LSM4	Q9Y4Z0	139 aa	Known RBP	13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	RYR2	Q92736	4967 aa		13.18	□□□□□ -0.3
SUPT20H-223	ENST00000497318	TMEM269	A0A1B0GVZ9	245 aa		13.17	□□□□□ -0.3
SUPT20H-223	ENST00000497318	MEX3A	A1L020	520 aa	Known RBP	13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms