RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 APLNRP35414 380 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 PCK1P35558 622 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 POLR2IP36954 125 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 P2RY2P41231 377 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 RANBP1P43487 201 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 DNASE1L1P49184 302 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 RGS6P49758 472 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 ERFP50548 548 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 OR12D2P58182 307 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 TAS2R31P59538 309 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 VSNL1P62760 191 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 CTAG1AP78358 180 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 NAB1Q13506 487 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 ANGPT1Q15389 498 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 CDNFQ49AH0 187 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 FAM222AQ5U5X8 452 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 RESP18Q5W5W9 173 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 KDM4DQ6B0I6 523 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 GUSBP11Q6P575 273 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 OPN5Q6U736 354 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SETD3Q86TU7 594 aaPredicted RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SLC7A5P1Q8MH63 180 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 C17orf78Q8N4C9 275 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 CYB561A3Q8NBI2 242 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 OR1S1Q8NH92 325 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 ENKURQ8TC29 256 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 NT5CQ8TCD5 201 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 PHOSPHO2Q8TCD6 241 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 DOK4Q8TEW6 326 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 DCAKDQ8WVC6 231 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 TMEM239Q8WW34 195 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 GHSRQ92847 366 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 TMEM159Q96B96 161 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 CCDC124Q96CT7 223 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SMARCD1Q96GM5 515 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 ADTRPQ96IZ2 230 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 Q96MT0 163 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 OR4K3Q96R72 315 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 PDCD1LG2Q9BQ51 273 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 LLPHQ9BRT6 129 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 COPS4Q9BT78 406 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SFXN3Q9BWM7 321 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 GGTLC1Q9BX51 225 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 BEX2Q9BXY8 128 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 FGF23Q9GZV9 251 aaPredicted RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 COA1Q9GZY4 146 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 OR52A5Q9H2C5 316 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 WDR55Q9H6Y2 383 aaPredicted RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 PLEKHA1Q9HB21 404 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 EXOSC4Q9NPD3 245 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 ACOT13Q9NPJ3 140 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 C8orf17Q9NRJ1 99 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 HEBP1Q9NRV9 189 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 TMEM100Q9NV29 134 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 MRM2Q9UI43 246 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 NXT1Q9UKK6 140 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 RAB23Q9ULC3 237 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 TFR2Q9UP52 801 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SLC7A11Q9UPY5 501 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 POFUT2Q9Y2G5 429 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 AP3M1Q9Y2T2 418 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 ACOT9Q9Y305 439 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SAMHD1Q9Y3Z3 626 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 GMEB1Q9Y692 573 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 SETD1AO15047 1707 aaKnown RBP1.17□□□□□ -2.22
VPS26A-208ENST00000497022 KIAA1671Q9BY89 1806 aa1.17□□□□□ -2.22
VPS26A-208ENST00000497022 MAP3K19Q56UN5 1328 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 YLPM1P49750 1951 aaKnown RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 IGHV6-1A0A0B4J1U7 121 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 IGHV3-72A0A0B4J1Y9 119 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 TRAV8-6A0A0B4J262 113 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 CCL15-CCL14A0A0B4J2E2 113 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 IGHV7-4-1A0A0J9YVY3 117 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 SLC5A10A0PJK1 596 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 ERICH2A1L162 156 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 OR5H1A6NKK0 313 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 IQCF5A8MTL0 148 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 BTNL10A8MVZ5 291 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 RNASEK-C17orf49H0YIS7 233 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 hCG_2039718K7EN88 272 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 M0R1X1 148 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 ENSAO43768 121 aaKnown RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 EIF1BO60739 113 aaKnown RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 HSPD1P10809 573 aaKnown RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 PSMB5P28074 263 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 PRSS3P35030 304 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 EIF1P41567 113 aaKnown RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 PSMD8P48556 350 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 PRLHRP49683 370 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 MTPNP58546 118 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 UBE2KP61086 200 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 IL5RAQ01344 420 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 LAMTOR4Q0VGL1 99 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 STX3Q13277 289 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 GUSBP1Q15486 140 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 TOMM34Q15785 309 aaPredicted RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 CCL15Q16663 113 aa1.16□□□□□ -2.22
VPS26A-208ENST00000497022 RNASE13Q5GAN3 156 aaKnown RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 SYT6Q5T7P8 510 aaPredicted RBP1.16□□□□□ -2.22
VPS26A-208ENST00000497022 ERICH5Q6P6B1 374 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms