RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 DHFRP00374 187 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 OXTP01178 125 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 SHBGP04278 402 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 CTXN2P0C2S0 81 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 THRAP10827 490 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 HLA-DMAP28067 261 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PSMB5P28074 263 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ARR3P36575 388 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 CTRLP40313 264 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 RFC3P40938 356 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 CSNK1DP48730 415 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 LINC00315P59091 139 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ACTBP60709 375 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 UBE2KP61086 200 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ACTA2P62736 377 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ACTG1P63261 375 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ACTG2P63267 376 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ACTC1P68032 377 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ACTA1P68133 377 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 TPBGQ13641 420 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF846Q147U1 533 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PSG5Q15238 335 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 NDUFAF6Q330K2 333 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PIGGQ5H8A4 983 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 OR2G6Q5TZ20 316 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 CST9Q5W186 159 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ELP2Q6IA86 826 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF767PQ75MW2 155 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ARPINQ7Z6K5 226 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 TMEM156Q8N614 296 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 EID2Q8N6I1 236 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PRELID2Q8N945 189 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 SUMF2Q8NBJ7 301 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF740Q8NDX6 193 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PHF10Q8WUB8 498 aaKnown RBP3.43□□□□□ -1.86
SF3B1-212ENST00000496458 CDS1Q92903 461 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 YIPF5Q969M3 257 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 OTUB2Q96DC9 234 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 HSFY1Q96LI6 401 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 SORT1Q99523 831 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 MICU1Q9BPX6 476 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 DCUN1D5Q9BTE7 237 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 SLC19A3Q9BZV2 496 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PORCNQ9H237 461 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 BOLA2Q9H3K6 86 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PLEKHA1Q9HB21 404 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 MCUBQ9NWR8 336 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 VAPAQ9P0L0 249 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ASB4Q9Y574 426 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 AP4S1Q9Y587 144 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF609O15014 1411 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ADAMTSL1Q8N6G6 1762 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 MN1Q10571 1320 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ECM29Q5VYK3 1845 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 COL1A1P02452 1464 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ARAP2Q8WZ64 1704 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 CNTNAP1P78357 1384 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 CASP8AP2Q9UKL3 1982 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 GLYATL1P3A0A0U1RQE8 302 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ANKRD20A5PA0PJZ0 165 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 LINC00862A6NCI5 91 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 H0YJX3 145 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 H3BSA7 217 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 K7EN84 100 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 SEMA3DO95025 777 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 DEXIO95424 95 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 TDP2O95551 362 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 TRAPPC2P0DI81 140 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 TRAPPC2BP0DI82 140 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 PET100P0DJ07 73 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 HLA-GP17693 338 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 LOXP28300 417 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 SERPINB1P30740 379 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 RBM34P42696 430 aaKnown RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 RPS10P46783 165 aaKnown RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 RGS6P49758 472 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 CEBPGP53567 150 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 UGT2B15P54855 530 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 APOC4P55056 127 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 OR2B8PP59922 312 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 SPCS3P61009 180 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 STXBP1P61764 594 aaKnown RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ESRRGP62508 458 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 TCP10Q12799 353 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 BNIP2Q12982 314 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 KRR1Q13601 381 aaKnown RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 DEFB115Q30KQ5 88 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 SLC36A2Q495M3 483 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ZBED5Q49AG3 693 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 VAX1Q5SQQ9 334 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 IDNKQ5T6J7 187 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ANKRD26P1Q6NSI1 321 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 C3orf33Q6P1S2 294 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 TRIM40Q6P9F5 258 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 TTC33Q6PID6 262 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 SSX7Q7RTT5 188 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 FAM220AQ7Z4H9 259 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 PIANPQ8IYJ0 282 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 PDIK1LQ8N165 341 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms