RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 C8orf46Q8TAG6 207 aa17.02■□□□□ 0.32
COL9A2-211ENST00000496215 CNIH3Q8TBE1 160 aa17.02■□□□□ 0.32
COL9A2-211ENST00000496215 ADAT3Q96EY9 351 aaPredicted RBP17.02■□□□□ 0.32
COL9A2-211ENST00000496215 SDSLQ96GA7 329 aa17.02■□□□□ 0.32
COL9A2-211ENST00000496215 ISG20L2Q9H9L3 353 aaKnown RBP17.02■□□□□ 0.32
COL9A2-211ENST00000496215 A0A1W2PQ09 198 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 OR4C45A6NMZ5 311 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 SLC1A7O00341 560 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 CAPZA1P52907 286 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 VMO1Q7Z5L0 202 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 OR10AC1Q8NH08 325 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 HAVCR2Q8TDQ0 301 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 GATAD2BQ8WXI9 593 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 LHX4Q969G2 390 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 FGGYQ96C11 551 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 C1orf147Q96MC9 270 aaPredicted RBP17.01■□□□□ 0.31
COL9A2-211ENST00000496215 JAM3Q9BX67 310 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 ELL3Q9HB65 397 aaPredicted RBP17.01■□□□□ 0.31
COL9A2-211ENST00000496215 HES4Q9HCC6 221 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 MAB21L2Q9Y586 359 aa17.01■□□□□ 0.31
COL9A2-211ENST00000496215 IGKV1-27A0A075B6S5 117 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 CENPVL3A0A0U1RRI6 287 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 MDFIC2A0A1B0GVS7 189 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 IRGMA1A4Y4 181 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 RFPL4AA6NLU0 287 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 RFPL4AL1F8VTS6 287 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 CCDC159P0C7I6 412 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 OCM2P0CE71 109 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 OCMP0CE72 109 aaPredicted RBP17■□□□□ 0.31
COL9A2-211ENST00000496215 RBP2P50120 134 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 UTS2BQ765I0 119 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 ZNF561Q8N587 486 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 DHRSXQ8N5I4 330 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 DNAAF1Q8NEP3 725 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 OR51A4Q8NGJ6 313 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 CEP19Q96LK0 163 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 DUX5Q96PT3 197 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 ZNF649Q9BS31 505 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 COMMD4Q9H0A8 199 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 FGF20Q9NP95 211 aaPredicted RBP17■□□□□ 0.31
COL9A2-211ENST00000496215 OR14J1Q9UGF5 321 aa17■□□□□ 0.31
COL9A2-211ENST00000496215 TRBV23-1A0A0A0MS06 115 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 IGHV1-69DA0A0B4J2H0 117 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 TMEM212A6NML5 194 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 CASQ2O14958 399 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-211ENST00000496215 KNG1P01042 644 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 IGHV1-69P01742 117 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 RPSAP08865 295 aaKnown RBP16.99■□□□□ 0.31
COL9A2-211ENST00000496215 PRKACBP22694 351 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 PRTN3P24158 256 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 AZGP1P25311 298 aaKnown RBP16.99■□□□□ 0.31
COL9A2-211ENST00000496215 PRDX2P32119 198 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 CEBPDP49716 269 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-211ENST00000496215 GBX2P52951 348 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-211ENST00000496215 ATP1B3P54709 279 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 ERVK11-1P61568 191 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 IL18R1Q13478 541 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 OGFRL1Q5TC84 451 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-211ENST00000496215 SLC25A26Q70HW3 274 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 CD177Q8N6Q3 437 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 SLAMF9Q96A28 289 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 SPSB1Q96BD6 273 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 VCXQ9H320 206 aa16.99■□□□□ 0.31
COL9A2-211ENST00000496215 IGKV1-9A0A0C4DH69 117 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 LIMS3P0CW19 117 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 LIMS4P0CW20 117 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 ATF1P18846 271 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 POU3F4P49335 361 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 ADARB1P78563 741 aaKnown RBP16.98■□□□□ 0.31
COL9A2-211ENST00000496215 DEFB112Q30KQ8 113 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 LHFPL2Q6ZUX7 228 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 FAM185AQ8N0U4 392 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 OR13C9Q8NGT0 318 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 OR5AK2Q8NH90 309 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 GCDHQ92947 438 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-211ENST00000496215 ZDHHC16Q969W1 377 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 SLC25A28Q96A46 364 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 OPALINQ96PE5 141 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 SIRT7Q9NRC8 400 aa16.98■□□□□ 0.31
COL9A2-211ENST00000496215 E9PI62 339 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 CLDN34H7C241 214 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 ZFPL1O95159 310 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 CYB5AP00167 134 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 DCKP27707 260 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 CAPGP40121 348 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 C12orf54Q6X4T0 127 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 PDZD9Q8IXQ8 264 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 Q8IYB0 196 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 TSEN15Q8WW01 171 aaKnown RBP16.97■□□□□ 0.31
COL9A2-211ENST00000496215 MTCH1Q9NZJ7 389 aa16.97■□□□□ 0.31
COL9A2-211ENST00000496215 TRBV2A0A0J9YWF9 115 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 M0R1W7 72 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 INMTO95050 263 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 RNASE1P07998 156 aaKnown RBP16.96■□□□□ 0.31
COL9A2-211ENST00000496215 MYL12AP19105 171 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 ETV1P50549 477 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 MTCP1P56278 107 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 GABPB1Q06547 395 aaPredicted RBP16.96■□□□□ 0.31
COL9A2-211ENST00000496215 BLMHQ13867 455 aa16.96■□□□□ 0.31
COL9A2-211ENST00000496215 SLC9A3R2Q15599 337 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms