RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CCL13Q99616 98 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 SNTG1Q9NSN8 517 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 KIR2DS1A0A191URI9 304 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 RHBDL1O75783 438 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 NXPH2O95156 264 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 CD1AP06126 327 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 PPIAL4GP0DN37 164 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 ADRA2CP18825 462 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 ATF1P18846 271 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 GABRA2P47869 451 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 RBP2P50120 134 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 IKZF1Q13422 519 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 UBE2V2Q15819 145 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 STUMQ69YW2 141 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 ZNF841Q6ZN19 808 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 SVOPQ8N4V2 548 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 PARP16Q8N5Y8 322 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 ZFP41Q8N8Y5 198 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 POC1AQ8NBT0 407 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 DNAAF1Q8NEP3 725 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 OR5T2Q8NGG2 359 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 CPNE2Q96FN4 548 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-209ENST00000496189 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 PKIBQ9C010 78 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 FGF23Q9GZV9 251 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-209ENST00000496189 WDR13Q9H1Z4 485 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 ZCCHC4Q9H5U6 513 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
SF3A1-209ENST00000496189 SIRT4Q9Y6E7 314 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-209ENST00000496189 A0A0A6YYJ9 748 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 PNMA8CA0A1B0GUJ8 204 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 AVPP01185 164 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 SOX2P48431 317 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 PAX8Q06710 450 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 IL24Q13007 206 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 GPR50Q13585 617 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 ATPAF1Q5TC12 328 aaPredicted RBP13.61□□□□□ -0.23
SF3A1-209ENST00000496189 METTL11BQ5VVY1 283 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 FIP1L1Q6UN15 594 aaKnown RBP13.61□□□□□ -0.23
SF3A1-209ENST00000496189 RBMS3Q6XE24 437 aaKnown RBP13.61□□□□□ -0.23
SF3A1-209ENST00000496189 LHFPL2Q6ZUX7 228 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 MS4A15Q8N5U1 240 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 FAM216BQ8N7L0 139 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 UFD1Q92890 307 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 OR5M11Q96RB7 305 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 SUCNR1Q9BXA5 334 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 ISYNA1Q9NPH2 558 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 CKLFQ9UBR5 152 aa13.61□□□□□ -0.23
SF3A1-209ENST00000496189 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 TNFRSF13BO14836 293 aaPredicted RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 MAGEB3O15480 346 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 ALX3O95076 343 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 PGA5P0DJD9 388 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 RAB3AP20336 220 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 AZGP1P25311 298 aaKnown RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 CAPZA1P52907 286 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 MTCP1P56278 107 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 PPP3R1P63098 170 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 TBCEQ15813 527 aaPredicted RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 Q499Y3 187 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 BTN2A1Q7KYR7 527 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 MKXQ8IYA7 352 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 Q8IYB0 196 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 CMTM4Q8IZR5 234 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 ANGPTL6Q8NI99 470 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 RGP1Q92546 391 aaPredicted RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 TMEM106AQ96A25 262 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 PGLYRP3Q96LB9 341 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 OPALINQ96PE5 141 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 SLC25A10Q9UBX3 287 aaPredicted RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 OPN4Q9UHM6 478 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 NUP50Q9UKX7 468 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 LSM2Q9Y333 95 aaKnown RBP13.6□□□□□ -0.23
SF3A1-209ENST00000496189 LRRC42Q9Y546 428 aa13.6□□□□□ -0.23
SF3A1-209ENST00000496189 RNF212BA8MTL3 300 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 SULT1B1O43704 296 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 NOS1APO75052 506 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-209ENST00000496189 PLATP00750 562 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 HCKP08631 526 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-209ENST00000496189 NDUFB7P17568 137 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 MPZP25189 248 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 MAPK3P27361 379 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-209ENST00000496189 FGF12P61328 243 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 PAX2Q02962 417 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 ACP7Q6ZNF0 438 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 ZNF788Q6ZQV5 615 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 C1orf229Q6ZS94 237 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-209ENST00000496189 ZNF367Q7RTV3 350 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 TMEM185AQ8NFB2 350 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 OR13C9Q8NGT0 318 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 SEH1LQ96EE3 360 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 CEP19Q96LK0 163 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 PCGF1Q9BSM1 259 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 MS4A7Q9GZW8 240 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-209ENST00000496189 SMURF1Q9HCE7 757 aa13.59□□□□□ -0.23
SF3A1-209ENST00000496189 WNK2Q9Y3S1 2297 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms