RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 OR2AT4A6NND4 320 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 TRAPPC2LH3BP13 241 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 TMPRSS2O15393 492 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 ANGPTL7O43827 346 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 MRPS14O60783 128 aaKnown RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 NOS1APO75052 506 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 ALX3O95076 343 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 NXPH2O95156 264 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 CALCBP10092 127 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 PSG2P11465 335 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 SELLP14151 372 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 IGFBP3P17936 291 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 TGFBR2P37173 567 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 DVL1P1P54792 670 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 ERVK11-1P61568 191 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 RPS25P62851 125 aaKnown RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 GNB2P62879 340 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 MLLT11Q13015 90 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 PDZK1IP1Q13113 114 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 TPBGQ13641 420 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 KISS1Q15726 138 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 NLRC3Q7RTR2 1065 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 ZNF367Q7RTV3 350 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 SATL1Q86VE3 508 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 ANGPTL6Q8NI99 470 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 TMEM203Q969S6 136 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 C12orf43Q96C57 262 aaKnown RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 DERL3Q96Q80 235 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 SSBP3Q9BWW4 388 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-212ENST00000495497 SMURF1Q9HCE7 757 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 NOX4Q9NPH5 578 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 LRCH1Q9Y2L9 728 aa16.18■□□□□ 0.18
HDAC4-212ENST00000495497 IGKV1D-17A0A075B6S4 117 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 IGKV1-12A0A0C4DH73 117 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 MAGEA13PA6NCF6 341 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 NDUFA2O43678 99 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 FOXH1O75593 365 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 IGKV1D-12P01611 117 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 CPEP16870 476 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 BCL3P20749 454 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 PCMT1P22061 227 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 GABRA2P47869 451 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 NPBWR2P48146 333 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 CEBPDP49716 269 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-212ENST00000495497 GPR50Q13585 617 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 ACSM3Q53FZ2 586 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 FAM27D1Q5T7N8 215 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 WDR25Q64LD2 544 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-212ENST00000495497 UNQ9370/PRO34162Q6UXP9 181 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 IL17RELQ6ZVW7 336 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 SVOPQ8N4V2 548 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 MS4A15Q8N5U1 240 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 CEP19Q96LK0 163 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 GAFA1Q96PS6 74 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 NEK6Q9HC98 313 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 HES4Q9HCC6 221 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 MMP26Q9NRE1 261 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 RASL12Q9NYN1 266 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 CLN8Q9UBY8 286 aa16.17■□□□□ 0.18
HDAC4-212ENST00000495497 TRAV20A0A0B4J274 112 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 MAGEB3O15480 346 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 ACAA1P09110 424 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-212ENST00000495497 BDKRB2P30411 391 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 ZP1P60852 638 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 PPP3R1P63098 170 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 IKZF1Q13422 519 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 CR1LQ2VPA4 569 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 ARMCX4Q5H9R4 360 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 FAHD2BQ6P2I3 314 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-212ENST00000495497 ZNF773Q6PK81 442 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 PHC2Q8IXK0 858 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 MKXQ8IYA7 352 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 FAHD2AQ96GK7 314 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 RBFOX1Q9NWB1 397 aaKnown RBP16.16■□□□□ 0.18
HDAC4-212ENST00000495497 IL36RNQ9UBH0 155 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 KAAG1Q9UBP8 84 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 OR14J1Q9UGF5 321 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 METRNQ9UJH8 293 aa16.16■□□□□ 0.18
HDAC4-212ENST00000495497 TLN2Q9Y4G6 2542 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 RFPL4AA6NLU0 287 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 A8MXK9 166 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 RFPL4AL1F8VTS6 287 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 GABRPO00591 440 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 DVL1O14640 695 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 GPX5O75715 221 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 MAS1P04201 325 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 FSTP19883 344 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 GP2P55259 537 aaKnown RBP16.15■□□□□ 0.18
HDAC4-212ENST00000495497 SSX1Q16384 188 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 SMIM21Q3B7S5 101 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 KCTD21Q4G0X4 260 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 ATPAF1Q5TC12 328 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-212ENST00000495497 DDI2Q5TDH0 399 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 MALRD1Q5VYJ5 2156 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 ZNF788Q6ZQV5 615 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 CEACAM19Q7Z692 300 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 CD177Q8N6Q3 437 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 GPER1Q99527 375 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 PPIL3Q9H2H8 161 aaKnown RBP16.15■□□□□ 0.18
HDAC4-212ENST00000495497 TMEM138Q9NPI0 162 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms